RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 KPTNQ9Y664 436 aa16.56■□□□□ 0.24
PSPC1-201ENST00000338910 EXPH5Q8NEV8 1989 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 LMX1BO60663 402 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 CLN5O75503 358 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 MPZL1O95297 269 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 ZNF41P51814 821 aaPredicted RBP16.55■□□□□ 0.24
PSPC1-201ENST00000338910 SUMO3P55854 103 aaPredicted RBP16.55■□□□□ 0.24
PSPC1-201ENST00000338910 RPL7L1Q6DKI1 246 aaKnown RBP16.55■□□□□ 0.24
PSPC1-201ENST00000338910 OR51F2Q8NH61 342 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 C5orf66Q9H5L9 145 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 TAF9BQ9HBM6 251 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 VSX1Q9NZR4 365 aaPredicted RBP16.55■□□□□ 0.24
PSPC1-201ENST00000338910 DNAJB11Q9UBS4 358 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 R4GN57 208 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 IGLV1-36A0A0B4J1U3 117 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 PMS2P1A4D2B8 440 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 HTR3BO95264 441 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 PRF1P14222 555 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 GNB3P16520 340 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 ZNF14P17017 642 aaPredicted RBP16.55■□□□□ 0.24
PSPC1-201ENST00000338910 EIF5AP63241 154 aaKnown RBP16.55■□□□□ 0.24
PSPC1-201ENST00000338910 QRFPP83859 136 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 PCOLCEQ15113 449 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 ACER2Q5QJU3 275 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 H1FNTQ75WM6 255 aaPredicted RBP16.55■□□□□ 0.24
PSPC1-201ENST00000338910 WDFY1Q8IWB7 410 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 TERB2Q8NHR7 220 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 MFSD8Q8NHS3 518 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 DDIT4LQ96D03 193 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 TUBA4BQ9H853 241 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 WDR54Q9H977 334 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 PARP11Q9NR21 331 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 EMC9Q9Y3B6 208 aa16.55■□□□□ 0.24
PSPC1-201ENST00000338910 CACNA1HO95180 2353 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 A6NLC8 198 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 TXNL1O43396 289 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 SFT2D2O95562 160 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 UMODP07911 640 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 FBP1P09467 338 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 ACKR3P25106 362 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 TLE3Q04726 772 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 TGIF1Q15583 401 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 FIP1L1Q6UN15 594 aaKnown RBP16.54■□□□□ 0.24
PSPC1-201ENST00000338910 CLEC18BQ6UXF7 455 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 SECTM1Q8WVN6 248 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 SPACA9Q96E40 222 aaPredicted RBP16.54■□□□□ 0.24
PSPC1-201ENST00000338910 MED29Q9NX70 200 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 PLA2G2EQ9NZK7 142 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 GPR132Q9UNW8 380 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 COA3Q9Y2R0 106 aaPredicted RBP16.54■□□□□ 0.24
PSPC1-201ENST00000338910 R4GMQ9 66 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 RALGAPA1Q6GYQ0 2036 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 ISG15P05161 165 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 ZNF883P0CG24 379 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 POU3F1Q03052 451 aaPredicted RBP16.54■□□□□ 0.24
PSPC1-201ENST00000338910 PRAMEF20Q5VT98 475 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 RTN4RL2Q86UN3 420 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 RNF138Q8WVD3 245 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 INTS12Q96CB8 462 aaKnown RBP16.54■□□□□ 0.24
PSPC1-201ENST00000338910 C5orf34Q96MH7 638 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 SDHAF3Q9NRP4 125 aa16.54■□□□□ 0.24
PSPC1-201ENST00000338910 CEACAM18A8MTB9 384 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 NDUFS6O75380 124 aaKnown RBP16.53■□□□□ 0.24
PSPC1-201ENST00000338910 KLF7O75840 302 aaPredicted RBP16.53■□□□□ 0.24
PSPC1-201ENST00000338910 ID4P47928 161 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 FMODQ06828 376 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 RAB32Q13637 225 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 SLC9A3R2Q15599 337 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 HMGN3Q15651 99 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 OR4K15Q8NH41 348 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 OR52N5Q8NH56 324 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 LYPD6BQ8NI32 183 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 OR10C1Q96KK4 312 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 OCSTAMPQ9BR26 566 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 G6PC2Q9NQR9 355 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 PRR13Q9NZ81 148 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 NXT1Q9UKK6 140 aaKnown RBP16.53■□□□□ 0.24
PSPC1-201ENST00000338910 FLVCR1Q9Y5Y0 555 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 B3GALT1Q9Y5Z6 326 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 FREM3P0C091 2139 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 NPIPA5E9PKD4 350 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 TAAR5O14804 337 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 IGHMP01871 453 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 OR8U9P0C7N5 309 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 IL15RAQ13261 267 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 PLPPR5Q32ZL2 321 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 AWAT1Q58HT5 328 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 TMEM268Q5VZI3 342 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 FAM219AQ8IW50 185 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 KDF1Q8NAX2 398 aaPredicted RBP16.53■□□□□ 0.24
PSPC1-201ENST00000338910 OR8U1Q8NH10 309 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 POC1BQ8TC44 478 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 NPIPA1Q9UND3 350 aa16.53■□□□□ 0.24
PSPC1-201ENST00000338910 C7orf77A4D0Y5 90 aa16.52■□□□□ 0.24
PSPC1-201ENST00000338910 MASP2O00187 686 aa16.52■□□□□ 0.24
PSPC1-201ENST00000338910 VSIG8P0DPA2 414 aa16.52■□□□□ 0.24
PSPC1-201ENST00000338910 RAB5AP20339 215 aa16.52■□□□□ 0.24
PSPC1-201ENST00000338910 MSX1P28360 303 aa16.52■□□□□ 0.24
PSPC1-201ENST00000338910 EIF2S3P41091 472 aaKnown RBP16.52■□□□□ 0.24
PSPC1-201ENST00000338910 GLP1RP43220 463 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms