RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 ADGRG3Q86Y34 549 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 OR1L3Q8NH93 324 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 SLC39A7Q92504 469 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 GPA33Q99795 319 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 ZNF331Q9NQX6 463 aaPredicted RBP12.29□□□□□ -0.44
RTN4-202ENST00000337526 HIF1ANQ9NWT6 349 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 UNC13CQ8NB66 2214 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 NKX6-3A6NJ46 265 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 ZNF891A8MT65 544 aaPredicted RBP12.29□□□□□ -0.44
RTN4-202ENST00000337526 MBP02144 154 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 HPXP02790 462 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 HTRA4P83105 476 aaPredicted RBP12.29□□□□□ -0.44
RTN4-202ENST00000337526 PDCD1Q15116 288 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 FXNQ16595 210 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 PHYHD1Q5SRE7 291 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 Q7L0L9 218 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 SLC38A6Q8IZM9 456 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 ZNF687Q8N1G0 1237 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 CISD2Q8N5K1 135 aaKnown RBP12.29□□□□□ -0.44
RTN4-202ENST00000337526 CNTD2Q9H8S5 307 aa12.29□□□□□ -0.44
RTN4-202ENST00000337526 SCN3AQ9NY46 2000 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 CLEC18AA5D8T8 446 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 TGOLN2O43493 480 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 APOA2P02652 100 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 SFTA3P0C7M3 94 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 CPN1P15169 458 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 CHRNB4P30926 498 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 PPIAP62937 165 aaKnown RBP12.28□□□□□ -0.44
RTN4-202ENST00000337526 H3F3AP84243 136 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 ETFDHQ16134 617 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 MIDNQ504T8 468 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 CDC20BQ86Y33 519 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 CLEC18CQ8NCF0 446 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 NPEPL1Q8NDH3 523 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 BPIFCQ8NFQ6 507 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 CIB3Q96Q77 187 aaPredicted RBP12.28□□□□□ -0.44
RTN4-202ENST00000337526 RYDENQ9NUL5 291 aaKnown RBP12.28□□□□□ -0.44
RTN4-202ENST00000337526 SFT2D2O95562 160 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 HOXC4P09017 264 aaPredicted RBP12.28□□□□□ -0.44
RTN4-202ENST00000337526 FABP6P51161 128 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 ZNF90Q03938 601 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 C1QL3Q5VWW1 255 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 GVQW1Q8N7I0 195 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 LY75O60449 1722 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 hCG_1809904A0A1W2PP81 198 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 A0A1W2PPE2 198 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 A0A1W2PR64 198 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 A0A1W2PRV1 198 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 H3BMH7 237 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 AQP7O14520 342 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 CTDSPLO15194 276 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 FUT7Q11130 342 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 SMAD4Q13485 552 aaKnown RBP12.28□□□□□ -0.44
RTN4-202ENST00000337526 AARDQ4LEZ3 155 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 TMEM91Q6ZNR0 172 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 LSMEM1Q8N8F7 131 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 ADPRHL1Q8NDY3 354 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 TPPP3Q9BW30 176 aa12.28□□□□□ -0.44
RTN4-202ENST00000337526 MRPL22Q9NWU5 206 aaKnown RBP12.28□□□□□ -0.44
RTN4-202ENST00000337526 A0A1W2PPQ1 181 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 MASP2O00187 686 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 DHRS3O75911 302 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 CRYAAP02489 173 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 OR10J4P0C629 311 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 ACOT6Q3I5F7 207 aaPredicted RBP12.27□□□□□ -0.44
RTN4-202ENST00000337526 TDHQ8IZJ6 230 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 COMMD1Q8N668 190 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 APOBEC3DQ96AK3 386 aaPredicted RBP12.27□□□□□ -0.44
RTN4-202ENST00000337526 IP6K3Q96PC2 410 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 C12orf10Q9HB07 376 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 SLC52A3Q9NQ40 469 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 PLPP3O14495 311 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 GSTZ1O43708 216 aaPredicted RBP12.27□□□□□ -0.44
RTN4-202ENST00000337526 RD3LP0DJH9 198 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 COL9A1P20849 921 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 IL3RAP26951 378 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 S100A7P31151 101 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 TIGITQ495A1 244 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 C6orf201Q7Z4U5 140 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 C20orf196Q8IYI0 205 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 FAM58AQ8N1B3 248 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 OR13D1Q8NGV5 346 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 FRRS1LQ9P0K9 344 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 TMED3Q9Y3Q3 217 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 V9GYS6 101 aa12.27□□□□□ -0.44
RTN4-202ENST00000337526 IGHV1OR21-1A0A087WYE8 117 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 CYTIPO60759 359 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 GSK3AP49840 483 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 CCL7P80098 99 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 CD226Q15762 336 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 TMEM92Q6UXU6 159 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 ZADH2Q8N4Q0 377 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 MCHR2Q969V1 340 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 PHYHIPLQ96FC7 376 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 SLC35E1Q96K37 410 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 VSTM2LQ96N03 204 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 FAAP24Q9BTP7 215 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 OR51I2Q9H344 312 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 PPP1R14DQ9NXH3 145 aa12.27□□□□□ -0.45
RTN4-202ENST00000337526 SULT1A3P0DMM9 295 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms