RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 ACP1P24666 158 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 LUMP51884 338 aaPredicted RBP7.71□□□□□ -1.17
SNCA-201ENST00000336904 RAC3P60763 192 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 RAB14P61106 215 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 TRA2AQ13595 282 aaKnown RBP eCLIP7.71□□□□□ -1.17
SNCA-201ENST00000336904 ZNF529Q6P280 563 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 TMEM17Q86X19 198 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 SULF2Q8IWU5 870 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 IL22RA1Q8N6P7 574 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 ADPRHL1Q8NDY3 354 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 CPEB3Q8NE35 698 aaKnown RBP7.71□□□□□ -1.17
SNCA-201ENST00000336904 OR2V1Q8NHB1 315 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 KCNG3Q8TAE7 436 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 TOMM40LQ969M1 308 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 FOXB1Q99853 325 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 UQCC2Q9BRT2 126 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 SLC7A10Q9NS82 523 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 B3GNT2Q9NY97 397 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 PCDHGA1Q9Y5H4 931 aa7.71□□□□□ -1.17
SNCA-201ENST00000336904 A0A087WZY1 265 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 DHRS7CA6NNS2 312 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 HOXB5P09067 269 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 CD59P13987 128 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 CFPP27918 469 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 SRD5A2P31213 254 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 SERPINF1P36955 418 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 OR3A2P47893 321 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 FXYD4P59646 89 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 HOXA4Q00056 320 aaPredicted RBP7.71□□□□□ -1.18
SNCA-201ENST00000336904 PLGLB1Q02325 96 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 FOXO1Q12778 655 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 OR1C1Q15619 314 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 ESCO2Q56NI9 601 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 C1QTNF12Q5T7M4 302 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 HES3Q5TGS1 186 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 ABHD17BQ5VST6 288 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 PEAR1Q5VY43 1037 aaPredicted RBP7.71□□□□□ -1.18
SNCA-201ENST00000336904 CLEC9AQ6UXN8 241 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 GSG1LQ6UXU4 331 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 OR13G1Q8NGZ3 307 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 HS3ST6Q96QI5 342 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 C5orf66Q9H5L9 145 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 SCPEP1Q9HB40 452 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 TMEM38BQ9NVV0 291 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 MBD2Q9UBB5 411 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 IL36RNQ9UBH0 155 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 RABL2AQ9UBK7 228 aaPredicted RBP7.71□□□□□ -1.18
SNCA-201ENST00000336904 UPB1Q9UBR1 384 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 RABL2BQ9UNT1 228 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 ICE1Q9Y2F5 2266 aa7.71□□□□□ -1.18
SNCA-201ENST00000336904 TTLL8A6PVC2 850 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 SLC33A1O00400 549 aaPredicted RBP7.7□□□□□ -1.18
SNCA-201ENST00000336904 CD79AP11912 226 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 RAB6AP20340 208 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 ZBTB25P24278 435 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 AKR1C2P52895 323 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 AKR1C1Q04828 323 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 SP6Q3SY56 376 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 PABPC1L2AQ5JQF8 200 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 SPATA46Q5T0L3 261 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 C10orf128Q5T292 105 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 RAB12Q6IQ22 244 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 NAXDQ8IW45 347 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 OR5H2Q8NGV7 314 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 OR1F12Q8NHA8 337 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 CCDC107Q8WV48 283 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 SGCZQ96LD1 299 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 PAPOLGQ9BWT3 736 aaKnown RBP7.7□□□□□ -1.18
SNCA-201ENST00000336904 PRRG4Q9BZD6 226 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 PLEKHJ1Q9NW61 149 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 DIDO1Q9BTC0 2240 aaKnown RBP7.7□□□□□ -1.18
SNCA-201ENST00000336904 H3BUI4 141 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 GEMIN2O14893 280 aaKnown RBP7.7□□□□□ -1.18
SNCA-201ENST00000336904 EFSO43281 561 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 SYNGR3O43761 229 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 SERPINA5P05154 406 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 SFTPBP07988 381 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 LSM6P62312 80 aaKnown RBP7.7□□□□□ -1.18
SNCA-201ENST00000336904 SSPNQ14714 243 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 ZNF239Q16600 458 aaKnown RBP7.7□□□□□ -1.18
SNCA-201ENST00000336904 AANATQ16613 207 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 ELP2Q6IA86 826 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 MOB3CQ70IA8 216 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 PGAP1Q75T13 922 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 HDDC2Q7Z4H3 204 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 LYG2Q86SG7 212 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 SEMA6DQ8NFY4 1073 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 OR5M8Q8NGP6 311 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 SPTSSAQ969W0 71 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 TMEM230Q96A57 120 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 MED30Q96HR3 178 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 LINC00052Q96N35 136 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 PRRT1Q99946 306 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 VRK1Q99986 396 aaPredicted RBP7.7□□□□□ -1.18
SNCA-201ENST00000336904 SLC25A21Q9BQT8 299 aaPredicted RBP7.7□□□□□ -1.18
SNCA-201ENST00000336904 ZNF471Q9BX82 626 aaPredicted RBP7.7□□□□□ -1.18
SNCA-201ENST00000336904 PECRQ9BY49 303 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 GSX2Q9BZM3 304 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 STRADBQ9C0K7 418 aa7.7□□□□□ -1.18
SNCA-201ENST00000336904 WNT5BQ9H1J7 359 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms