RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 TMEM65Q6PI78 240 aa7.29□□□□□ -1.24
HPS4-201ENST00000336873 OR2W3Q7Z3T1 314 aa7.29□□□□□ -1.24
HPS4-201ENST00000336873 C1QL2Q7Z5L3 287 aa7.29□□□□□ -1.24
HPS4-201ENST00000336873 ZNF100Q8IYN0 542 aa7.29□□□□□ -1.24
HPS4-201ENST00000336873 AGBL5Q8NDL9 886 aa7.29□□□□□ -1.24
HPS4-201ENST00000336873 SPTSSAQ969W0 71 aa7.29□□□□□ -1.24
HPS4-201ENST00000336873 WBP1Q96G27 269 aa7.29□□□□□ -1.24
HPS4-201ENST00000336873 EVA1AQ9H8M9 152 aa7.29□□□□□ -1.24
HPS4-201ENST00000336873 EML5Q05BV3 1969 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 USF3Q68DE3 2245 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 A0A1W2PPC1 479 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 C5orf63A6NC05 138 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 LILRA5A6NI73 299 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 TMEM200CA6NKL6 621 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 ZNF814B7Z6K7 855 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 SHOXO15266 292 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 LRP3O75074 770 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 FOLR3P41439 243 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 OR2B8PP59922 312 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 GPR157Q5UAW9 335 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 C11orf87Q6NUJ2 197 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 ADAM5Q6NVV9 412 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 SLC25A26Q70HW3 274 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 C5orf24Q7Z6I8 188 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 LURAP1LQ8IV03 231 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 FBXL14Q8N1E6 418 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 BPIFCQ8NFQ6 507 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 S100PBPQ96BU1 408 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 SCARF2Q96GP6 870 aaPredicted RBP7.28□□□□□ -1.24
HPS4-201ENST00000336873 LURAP1Q96LR2 239 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 ZNF426Q9BUY5 554 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 FAM234AQ9H0X4 552 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 B3GALT5Q9Y2C3 310 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 PRELID3BQ9Y3B1 194 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 WIF1Q9Y5W5 379 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 PCNX2A6NKB5 2137 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 TRIM77I1YAP6 450 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 C1QL1O75973 258 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 CST7O76096 145 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 RCC1P18754 421 aaPredicted RBP7.28□□□□□ -1.24
HPS4-201ENST00000336873 GALP22466 123 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 MICBQ29980 383 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 CEACAM16Q2WEN9 425 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 PDZD11Q5EBL8 140 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 MYPOPQ86VE0 399 aaPredicted RBP7.28□□□□□ -1.24
HPS4-201ENST00000336873 CXorf67Q86X51 503 aaPredicted RBP7.28□□□□□ -1.24
HPS4-201ENST00000336873 C17orf78Q8N4C9 275 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 CLEC1AQ8NC01 280 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 OR56B1Q8NGI3 324 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 TERB2Q8NHR7 220 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 FAM213BQ8TBF2 198 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 ISOC2Q96AB3 205 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 SPACA9Q96E40 222 aaPredicted RBP7.28□□□□□ -1.24
HPS4-201ENST00000336873 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.28□□□□□ -1.243e-7■■■■□ 19.5
HPS4-201ENST00000336873 C9orf170A2RU37 121 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 NPIPB9F8W1W9 429 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 HSD17B6O14756 317 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 MRPL33O75394 65 aaKnown RBP7.28□□□□□ -1.24
HPS4-201ENST00000336873 HLA-HP01893 362 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 PCP4P48539 62 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 SSR4P51571 173 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 SSTP61278 116 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 FHL1Q13642 323 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 IGFBP7Q16270 282 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 SLC22A25Q6T423 547 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 GJC3Q8NFK1 279 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 ARL11Q969Q4 196 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 ZNF501Q96CX3 271 aaPredicted RBP7.28□□□□□ -1.24
HPS4-201ENST00000336873 GPR137Q96N19 417 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 CNTNAP3BQ96NU0 1288 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 CCNL2Q96S94 520 aaPredicted RBP7.28□□□□□ -1.24
HPS4-201ENST00000336873 RGCCQ9H4X1 137 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 BIN3Q9NQY0 253 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 P4HTMQ9NXG6 502 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 SH3BGRL2Q9UJC5 107 aa7.28□□□□□ -1.24
HPS4-201ENST00000336873 OR2M5A3KFT3 312 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 FAM74A7A6NL05 159 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 SNRPGP15A8MWD9 76 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 OR5H8P0DN80 308 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 ZNF14P17017 642 aaPredicted RBP7.27□□□□□ -1.25
HPS4-201ENST00000336873 FCGR2CP31995 323 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 FAM74A3Q4VXF1 159 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 LYG2Q86SG7 212 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 CNEP1R1Q8N9A8 125 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 ABHD3Q8WU67 409 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 LIPHQ8WWY8 451 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 SULT4A1Q9BR01 284 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 UFSP2Q9NUQ7 469 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 LUZP4Q9P127 313 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 CBY1Q9Y3M2 126 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 SMG1Q96Q15 3661 aaKnown RBP7.27□□□□□ -1.25
HPS4-201ENST00000336873 A0A1W2PQM1 296 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 HMGB3O15347 200 aaKnown RBP7.27□□□□□ -1.25
HPS4-201ENST00000336873 ABHD16AO95870 558 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 ONECUT2O95948 504 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 ADH6P28332 368 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 NOVA1P51513 510 aaKnown RBP7.27□□□□□ -1.25
HPS4-201ENST00000336873 PIGPP57054 158 aa7.27□□□□□ -1.25
HPS4-201ENST00000336873 RPL7L1Q6DKI1 246 aaKnown RBP7.27□□□□□ -1.25
HPS4-201ENST00000336873 ACOT7LQ6ZUV0 252 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms