RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 NID1P14543 1247 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 ADRA1AP35348 466 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 DIO1P49895 249 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 HNRNPA1L2Q32P51 320 aaKnown RBP5.6□□□□□ -1.51
CSMD1-201ENST00000335551 FAM169BQ8N8A8 192 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 PFN4Q8NHR9 129 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 DUSP23Q9BVJ7 150 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 OR2D2Q9H210 308 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 CMC2Q9NRP2 79 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 IL17CQ9P0M4 197 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 HSFX1Q9UBD0 423 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 NAGKQ9UJ70 344 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 OR2W5A6NFC9 320 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 F5H697 171 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 ZNF511Q8NB15 262 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 AUNIPQ9H7T9 357 aa5.6□□□□□ -1.51
CSMD1-201ENST00000335551 USF3Q68DE3 2245 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 HOXC13P31276 330 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 SRP14P37108 136 aaKnown RBP5.59□□□□□ -1.51
CSMD1-201ENST00000335551 RNF39Q9H2S5 420 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 SMDT1Q9H4I9 107 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 CYSLTR2Q9NS75 346 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 CTSFQ9UBX1 484 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 FOXJ3Q9UPW0 622 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 COX20Q5RI15 118 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 SLC35E4Q6ICL7 350 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 STAC2Q6ZMT1 411 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 MAVSQ7Z434 540 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 PELI3Q8N2H9 469 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 DDA1Q9BW61 102 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 SLC22A13Q9Y226 551 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 A0A0A6YYC8 382 aaPredicted RBP5.59□□□□□ -1.51
CSMD1-201ENST00000335551 B4E171 279 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 I3L1I5 382 aaPredicted RBP5.59□□□□□ -1.51
CSMD1-201ENST00000335551 VAMP5O95183 116 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 TAS2R60P59551 318 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 DHRS2Q13268 280 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 FAAP20Q6NZ36 180 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 TMEM230Q96A57 120 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 UTP23Q9BRU9 249 aaKnown RBP5.59□□□□□ -1.51
CSMD1-201ENST00000335551 LYRM4Q9HD34 91 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 DOT1LQ8TEK3 1739 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 ZC3H12DA2A288 527 aaKnown RBP5.59□□□□□ -1.51
CSMD1-201ENST00000335551 KCNAB3O43448 404 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 MPC2O95563 127 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 HOXA6P31267 233 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 PPP1CAP62136 330 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 PMP22Q01453 160 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 DSC1Q08554 894 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 KHDC3LQ587J8 217 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 MED25Q71SY5 747 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 MIEN1Q9BRT3 115 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 RNF167Q9H6Y7 350 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 ZAR1LA6NP61 321 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 SDCBPO00560 298 aaPredicted RBP5.59□□□□□ -1.51
CSMD1-201ENST00000335551 CBR3O75828 277 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 HLA-GP17693 338 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 POLR2IP36954 125 aaKnown RBP5.59□□□□□ -1.51
CSMD1-201ENST00000335551 CALHM3Q86XJ0 350 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 GPR84Q9NQS5 396 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 MED13Q9UHV7 2174 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 NDUFS8O00217 210 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 SLC35E2P0CK97 266 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 RRADP55042 308 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 CDK5R1Q15078 307 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 GABRA6Q16445 453 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 LINC00303Q3SY05 128 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 C1QTNF12Q5T7M4 302 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 TMEM64Q6YI46 380 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 PELI1Q96FA3 418 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 LINC00052Q96N35 136 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 TXNIPQ9H3M7 391 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 IFITM10A6NMD0 228 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 SMAD6O43541 496 aaKnown RBP5.59□□□□□ -1.51
CSMD1-201ENST00000335551 CCL5P13501 91 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 NTSR1P30989 418 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 CTBSQ01459 385 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 IL13RA2Q14627 380 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 NKAIN1Q4KMZ8 207 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 C17orf78Q8N4C9 275 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 FAM174AQ8TBP5 190 aa5.59□□□□□ -1.51
CSMD1-201ENST00000335551 MRPS24Q96EL2 167 aaKnown RBP5.59□□□□□ -1.51
CSMD1-201ENST00000335551 C11orf68Q9H3H3 251 aaKnown RBP5.59□□□□□ -1.51
CSMD1-201ENST00000335551 COL11A1P12107 1806 aaPredicted RBP5.59□□□□□ -1.51
CSMD1-201ENST00000335551 FIGNL2A6NMB9 653 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 MS4A18H0YCH9 400 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 SLC25A5P05141 298 aaKnown RBP5.59□□□□□ -1.52
CSMD1-201ENST00000335551 GP1BAP07359 652 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 SPNP16150 400 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 TBXA2RP21731 343 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 MS4A18Q3C1V0 323 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 GOT1L1Q8NHS2 421 aaPredicted RBP5.59□□□□□ -1.52
CSMD1-201ENST00000335551 ADAMTS17Q8TE56 1095 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 LPAR5Q9H1C0 372 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 TMEM167BQ9NRX6 74 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 OR4C46A6NHA9 309 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 H0YGG7 62 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 HCRTR1O43613 425 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 FGF18O76093 207 aa5.59□□□□□ -1.52
CSMD1-201ENST00000335551 CDC34P49427 236 aaPredicted RBP5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms