RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 LY6HO94772 140 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 ADRA2CP18825 462 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 CAV3P56539 151 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 VBP1P61758 197 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 ZNF718Q3SXZ3 478 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 SMUG1Q53HV7 270 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 YIF1BQ5BJH7 314 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 FAM209AQ5JX71 171 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 TMEM244Q5VVB8 128 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 CD200R1LQ6Q8B3 271 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 WDR86Q86TI4 376 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 BATF2Q8N1L9 274 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 TRMT10AQ8TBZ6 339 aaKnown RBP14.07□□□□□ -0.16
SHOX-201ENST00000334060 GPR148Q8TDV2 347 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 UBASH3BQ8TF42 649 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 PIGCQ92535 297 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 PLEKHF2Q9H8W4 249 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 TXNL4BQ9NX01 149 aaKnown RBP14.07□□□□□ -0.16
SHOX-201ENST00000334060 DHDHQ9UQ10 334 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 MAP1AP78559 2803 aaPredicted RBP14.07□□□□□ -0.16
SHOX-201ENST00000334060 TRBV5-7A0A0A0MS05 114 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 TIMM8AO60220 97 aaPredicted RBP14.07□□□□□ -0.16
SHOX-201ENST00000334060 NDUFS7O75251 213 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 NCR1O76036 304 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 RAC2P15153 192 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 SERPINF1P36955 418 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 MRPL28Q13084 256 aaKnown RBP14.07□□□□□ -0.16
SHOX-201ENST00000334060 Q499Y3 187 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 UNQ9370/PRO34162Q6UXP9 181 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 Q6ZSR3 168 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 TMEM200AQ86VY9 491 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 SEMA6DQ8NFY4 1073 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 TRAF4Q9BUZ4 470 aaPredicted RBP14.07□□□□□ -0.16
SHOX-201ENST00000334060 PAPOLGQ9BWT3 736 aaKnown RBP14.07□□□□□ -0.16
SHOX-201ENST00000334060 GON7Q9BXV9 100 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 PLK3Q9H4B4 646 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 CMAHPQ9Y471 501 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 ITPR2Q14571 2701 aa14.07□□□□□ -0.16
SHOX-201ENST00000334060 IGKV1-27A0A075B6S5 117 aa14.06□□□□□ -0.16
SHOX-201ENST00000334060 RGS9O75916 674 aaPredicted RBP14.06□□□□□ -0.16
SHOX-201ENST00000334060 CRYZL1O95825 349 aa14.06□□□□□ -0.16
SHOX-201ENST00000334060 DANCRP0C864 163 aa14.06□□□□□ -0.16
SHOX-201ENST00000334060 GCH1P30793 250 aa14.06□□□□□ -0.16
SHOX-201ENST00000334060 THBS2P35442 1172 aa14.06□□□□□ -0.16
SHOX-201ENST00000334060 KLF3P57682 345 aaPredicted RBP14.06□□□□□ -0.16
SHOX-201ENST00000334060 TLE4Q04727 773 aa14.06□□□□□ -0.16
SHOX-201ENST00000334060 ZFP69Q49AA0 526 aa14.06□□□□□ -0.16
SHOX-201ENST00000334060 OR5L1Q8NGL2 311 aa14.06□□□□□ -0.16
SHOX-201ENST00000334060 PIGTQ969N2 578 aa14.06□□□□□ -0.16
SHOX-201ENST00000334060 MARVELD3Q96A59 401 aa14.06□□□□□ -0.16
SHOX-201ENST00000334060 CYYR1Q96J86 154 aa14.06□□□□□ -0.16
SHOX-201ENST00000334060 ZNF442Q9H7R0 627 aa14.06□□□□□ -0.16
SHOX-201ENST00000334060 TREM2Q9NZC2 230 aa14.06□□□□□ -0.16
SHOX-201ENST00000334060 LAMP3Q9UQV4 416 aa14.06□□□□□ -0.16
SHOX-201ENST00000334060 IQCF6A8MYZ5 107 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 F5H5P2 479 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 HS3ST1O14792 307 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 SPRY3O43610 288 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 IGHV3-13P01766 116 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 MAS1P04201 325 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 KITLGP21583 273 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 GNALP38405 381 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 OR10A3P58181 314 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 MRPS15P82914 257 aaKnown RBP14.05□□□□□ -0.16
SHOX-201ENST00000334060 GPR50Q13585 617 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 METAP1DQ6UB28 335 aaPredicted RBP14.05□□□□□ -0.16
SHOX-201ENST00000334060 MUC15Q8N387 334 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 NDNFQ8TB73 568 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 RFT1Q96AA3 541 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 ABCB10Q9NRK6 738 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 STUB1Q9UNE7 303 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 SPEF1Q9Y4P9 236 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 GMDSO60547 372 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 CD1AP06126 327 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 CDKN1AP38936 164 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 PRDX4Q13162 271 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 SWI5Q1ZZU3 235 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 STEAP3Q658P3 488 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 SSX8Q7RTT4 187 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 OR6F1Q8NGZ6 308 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 FBXW5Q969U6 566 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 DHRS9Q9BPW9 319 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 RGCCQ9H4X1 137 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 PLEKHA1Q9HB21 404 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 DCAF16Q9NXF7 216 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 PMF1-BGLAPU3KQ54 211 aa14.05□□□□□ -0.16
SHOX-201ENST00000334060 LOC100289279A0A1B0GTE1 492 aa14.04□□□□□ -0.16
SHOX-201ENST00000334060 AIREO43918 545 aa14.04□□□□□ -0.16
SHOX-201ENST00000334060 NAT1P18440 290 aa14.04□□□□□ -0.16
SHOX-201ENST00000334060 APOBEC3AP31941 199 aaPredicted RBP14.04□□□□□ -0.16
SHOX-201ENST00000334060 MXD1Q05195 221 aa14.04□□□□□ -0.16
SHOX-201ENST00000334060 MAB21L1Q13394 359 aa14.04□□□□□ -0.16
SHOX-201ENST00000334060 TMEM42Q69YG0 159 aa14.04□□□□□ -0.16
SHOX-201ENST00000334060 MOB3CQ70IA8 216 aa14.04□□□□□ -0.16
SHOX-201ENST00000334060 OR8G5Q8NG78 346 aa14.04□□□□□ -0.16
SHOX-201ENST00000334060 KCNK15Q9H427 330 aa14.04□□□□□ -0.16
SHOX-201ENST00000334060 CACNG2Q9Y698 323 aa14.04□□□□□ -0.16
SHOX-201ENST00000334060 CHD3Q12873 2000 aaKnown RBP14.04□□□□□ -0.16
SHOX-201ENST00000334060 TRDV1A0A1B0GX56 115 aa14.03□□□□□ -0.16
SHOX-201ENST00000334060 LOC390937A0A1W2PQ73 354 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms