RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 SIGIRRQ6IA17 410 aa12.72□□□□□ -0.37
TPM3-206ENST00000330188 AAED1Q7RTV5 226 aa12.72□□□□□ -0.37
TPM3-206ENST00000330188 OR2AE1Q8NHA4 323 aa12.72□□□□□ -0.37
TPM3-206ENST00000330188 PSMF1Q92530 271 aa12.72□□□□□ -0.37
TPM3-206ENST00000330188 ALKBH3Q96Q83 286 aaPredicted RBP12.72□□□□□ -0.37
TPM3-206ENST00000330188 C1QTNF6Q9BXI9 259 aa12.72□□□□□ -0.37
TPM3-206ENST00000330188 GPR173Q9NS66 373 aa12.72□□□□□ -0.37
TPM3-206ENST00000330188 P4HTMQ9NXG6 502 aa12.72□□□□□ -0.37
TPM3-206ENST00000330188 RNF222A6NCQ9 220 aa12.71□□□□□ -0.37
TPM3-206ENST00000330188 TRAPPC6AO75865 159 aa12.71□□□□□ -0.37
TPM3-206ENST00000330188 OR2F2O95006 317 aa12.71□□□□□ -0.37
TPM3-206ENST00000330188 ZNF883P0CG24 379 aa12.71□□□□□ -0.37
TPM3-206ENST00000330188 OR2F1Q13607 317 aa12.71□□□□□ -0.37
TPM3-206ENST00000330188 TMEM128Q5BJH2 165 aa12.71□□□□□ -0.37
TPM3-206ENST00000330188 JMJD6Q6NYC1 403 aaPredicted RBP12.71□□□□□ -0.37
TPM3-206ENST00000330188 RAB11FIP2Q7L804 512 aa12.71□□□□□ -0.37
TPM3-206ENST00000330188 PEG10Q86TG7 708 aaKnown RBP12.71□□□□□ -0.37
TPM3-206ENST00000330188 LHFPL1Q86WI0 220 aa12.71□□□□□ -0.37
TPM3-206ENST00000330188 TMEM185AQ8NFB2 350 aa12.71□□□□□ -0.37
TPM3-206ENST00000330188 SEMA6DQ8NFY4 1073 aa12.71□□□□□ -0.37
TPM3-206ENST00000330188 OR13G1Q8NGZ3 307 aa12.71□□□□□ -0.37
TPM3-206ENST00000330188 OR1F12Q8NHA8 337 aa12.71□□□□□ -0.37
TPM3-206ENST00000330188 ST8SIA2Q92186 375 aa12.71□□□□□ -0.37
TPM3-206ENST00000330188 S100A13Q99584 98 aa12.71□□□□□ -0.37
TPM3-206ENST00000330188 ST6GALNAC5Q9BVH7 336 aa12.71□□□□□ -0.37
TPM3-206ENST00000330188 WDR13Q9H1Z4 485 aa12.71□□□□□ -0.37
TPM3-206ENST00000330188 MRPS18CQ9Y3D5 142 aaKnown RBP12.71□□□□□ -0.37
TPM3-206ENST00000330188 KCNMB2Q9Y691 235 aa12.71□□□□□ -0.37
TPM3-206ENST00000330188 DOCK10Q96BY6 2186 aa12.71□□□□□ -0.37
TPM3-206ENST00000330188 DHRS7CA6NNS2 312 aa12.71□□□□□ -0.38
TPM3-206ENST00000330188 SCO1O75880 301 aa12.71□□□□□ -0.38
TPM3-206ENST00000330188 B4GALT1P15291 398 aa12.71□□□□□ -0.38
TPM3-206ENST00000330188 ZNF32P17041 273 aa12.71□□□□□ -0.38
TPM3-206ENST00000330188 CPT2P23786 658 aa12.71□□□□□ -0.38
TPM3-206ENST00000330188 FPR2P25090 351 aa12.71□□□□□ -0.38
TPM3-206ENST00000330188 GDF1P27539 372 aa12.71□□□□□ -0.38
TPM3-206ENST00000330188 CYB561P49447 251 aa12.71□□□□□ -0.38
TPM3-206ENST00000330188 RGS19P49795 217 aa12.71□□□□□ -0.38
TPM3-206ENST00000330188 SNU13P55769 128 aaKnown RBP12.71□□□□□ -0.38
TPM3-206ENST00000330188 SCRN3Q0VDG4 424 aa12.71□□□□□ -0.38
TPM3-206ENST00000330188 KRTAP27-1Q3LI81 207 aa12.71□□□□□ -0.38
TPM3-206ENST00000330188 SULF2Q8IWU5 870 aa12.71□□□□□ -0.38
TPM3-206ENST00000330188 SUN5Q8TC36 379 aa12.71□□□□□ -0.38
TPM3-206ENST00000330188 MAFIPQ8WZ33 124 aa12.71□□□□□ -0.38
TPM3-206ENST00000330188 REEP6Q96HR9 211 aa12.71□□□□□ -0.38
TPM3-206ENST00000330188 TAAR9Q96RI9 348 aa12.71□□□□□ -0.38
TPM3-206ENST00000330188 VRK1Q99986 396 aaPredicted RBP12.71□□□□□ -0.38
TPM3-206ENST00000330188 ZPBPQ9BS86 351 aa12.71□□□□□ -0.38
TPM3-206ENST00000330188 SPRY4Q9C004 299 aa12.71□□□□□ -0.38
TPM3-206ENST00000330188 ELL3Q9HB65 397 aaPredicted RBP12.71□□□□□ -0.38
TPM3-206ENST00000330188 NUP50Q9UKX7 468 aa12.71□□□□□ -0.38
TPM3-206ENST00000330188 OR6C6A6NF89 314 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 SERPINE3A8MV23 424 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 EEF1E1-BLOC1S5C9J1V9 151 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 F10P00742 488 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 PATE4P0C8F1 98 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 DLSTP36957 453 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 MPLP40238 635 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 FOXO1Q12778 655 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 ATXN7L3Q14CW9 347 aaPredicted RBP12.7□□□□□ -0.38
TPM3-206ENST00000330188 CCDC157Q569K6 752 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 AADACL3Q5VUY0 350 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 ACOT7LQ6ZUV0 252 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 CSNK2A3Q8NEV1 391 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 OR1S1Q8NH92 325 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 AKR7LQ8NHP1 331 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 CCDC120Q96HB5 630 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 FOXB1Q99853 325 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 RTBDNQ9BSG5 229 aaPredicted RBP12.7□□□□□ -0.38
TPM3-206ENST00000330188 STRADBQ9C0K7 418 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 OSGIN2Q9Y236 505 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 MUC3AQ02505 3323 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 KANTRA0A1W2PQU2 76 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 ZSCAN5BA6NJL1 495 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 BCL2L11O43521 198 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 CA11O75493 328 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 SFT2D2O95562 160 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 CNR1P21554 472 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 SERPINF1P36955 418 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 OR3A2P47893 321 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 GFRA1P56159 465 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 TAS2R46P59540 309 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 SPSB1Q96BD6 273 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 Q96M66 194 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 DHRS9Q9BPW9 319 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 ARRDC1-AS1Q9H2J1 176 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 PFDN2Q9UHV9 154 aa12.7□□□□□ -0.38
TPM3-206ENST00000330188 CNTRLQ7Z7A1 2325 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 C5orf51A6NDU8 294 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 C9orf172C9J069 976 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 SDCBPO00560 298 aaPredicted RBP12.69□□□□□ -0.38
TPM3-206ENST00000330188 CYTIPO60759 359 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 LCATP04180 440 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 CRHP06850 196 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 PI3P19957 117 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 HTR5AP47898 357 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 SUPT4H1P63272 117 aaKnown RBP12.69□□□□□ -0.38
TPM3-206ENST00000330188 PSG4Q00888 419 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 BAMBIQ13145 260 aa12.69□□□□□ -0.38
TPM3-206ENST00000330188 ARL6IP1Q15041 203 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms