RNA–Protein interactions for RNA: ENST00000329078.7

SPNS2-201, Transcript of sphingolipid transporter 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPNS2, Length 3,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-201ENST00000329078 TWSG1Q9GZX9 223 aa17.56■□□□□ 0.4
SPNS2-201ENST00000329078 EP300Q09472 2414 aaPredicted RBP17.55■□□□□ 0.4
SPNS2-201ENST00000329078 TMEM225BP0DP42 221 aa17.55■□□□□ 0.4
SPNS2-201ENST00000329078 RAB2AP61019 212 aa17.55■□□□□ 0.4
SPNS2-201ENST00000329078 CDCP2Q5VXM1 449 aa17.55■□□□□ 0.4
SPNS2-201ENST00000329078 PPP1R3BQ86XI6 285 aa17.55■□□□□ 0.4
SPNS2-201ENST00000329078 OR10S1Q8NGN2 331 aa17.55■□□□□ 0.4
SPNS2-201ENST00000329078 CD300LFQ8TDQ1 290 aa17.55■□□□□ 0.4
SPNS2-201ENST00000329078 A0A1W2PQD3 144 aa17.55■□□□□ 0.4
SPNS2-201ENST00000329078 WIPF3A6NGB9 483 aa17.55■□□□□ 0.4
SPNS2-201ENST00000329078 ZFAND5O76080 213 aa17.55■□□□□ 0.4
SPNS2-201ENST00000329078 CSRP1P21291 193 aaKnown RBP17.55■□□□□ 0.4
SPNS2-201ENST00000329078 CCNOP22674 350 aa17.55■□□□□ 0.4
SPNS2-201ENST00000329078 GLRA1P23415 457 aa17.55■□□□□ 0.4
SPNS2-201ENST00000329078 FXYD4P59646 89 aa17.55■□□□□ 0.4
SPNS2-201ENST00000329078 ZNF616Q08AN1 781 aa17.55■□□□□ 0.4
SPNS2-201ENST00000329078 MEF2DQ14814 521 aa17.55■□□□□ 0.4
SPNS2-201ENST00000329078 C9orf135Q5VTT2 229 aa17.55■□□□□ 0.4
SPNS2-201ENST00000329078 ZNF574Q6ZN55 896 aaPredicted RBP17.55■□□□□ 0.4
SPNS2-201ENST00000329078 OR2AE1Q8NHA4 323 aa17.55■□□□□ 0.4
SPNS2-201ENST00000329078 SECTM1Q8WVN6 248 aa17.55■□□□□ 0.4
SPNS2-201ENST00000329078 RNF133Q8WVZ7 376 aa17.55■□□□□ 0.4
SPNS2-201ENST00000329078 UCN2Q96RP3 112 aa17.55■□□□□ 0.4
SPNS2-201ENST00000329078 SULT4A1Q9BR01 284 aa17.55■□□□□ 0.4
SPNS2-201ENST00000329078 LHFPL6Q9Y693 200 aa17.55■□□□□ 0.4
SPNS2-201ENST00000329078 GUSBP08236 651 aa17.54■□□□□ 0.4
SPNS2-201ENST00000329078 PCP4P48539 62 aa17.54■□□□□ 0.4
SPNS2-201ENST00000329078 ZNF260Q3ZCT1 412 aa17.54■□□□□ 0.4
SPNS2-201ENST00000329078 DMRTC2Q8IXT2 367 aaPredicted RBP17.54■□□□□ 0.4
SPNS2-201ENST00000329078 RNF141Q8WVD5 230 aa17.54■□□□□ 0.4
SPNS2-201ENST00000329078 OCIAD1Q9NX40 245 aa17.54■□□□□ 0.4
SPNS2-201ENST00000329078 MRPS17Q9Y2R5 130 aaKnown RBP17.54■□□□□ 0.4
SPNS2-201ENST00000329078 CACNA1GO43497 2377 aa17.54■□□□□ 0.4
SPNS2-201ENST00000329078 SPTBN2O15020 2390 aa17.54■□□□□ 0.4
SPNS2-201ENST00000329078 PSMB6P28072 239 aa17.54■□□□□ 0.4
SPNS2-201ENST00000329078 GALNSP34059 522 aa17.54■□□□□ 0.4
SPNS2-201ENST00000329078 OPRM1P35372 400 aa17.54■□□□□ 0.4
SPNS2-201ENST00000329078 MICBQ29980 383 aa17.54■□□□□ 0.4
SPNS2-201ENST00000329078 ZNF813Q6ZN06 617 aa17.54■□□□□ 0.4
SPNS2-201ENST00000329078 NKAIN3Q8N8D7 197 aa17.54■□□□□ 0.4
SPNS2-201ENST00000329078 MYOTQ9UBF9 498 aa17.54■□□□□ 0.4
SPNS2-201ENST00000329078 MBTPS2O43462 519 aa17.54■□□□□ 0.4
SPNS2-201ENST00000329078 TRAPPC6AO75865 159 aa17.54■□□□□ 0.4
SPNS2-201ENST00000329078 C1QL2Q7Z5L3 287 aa17.54■□□□□ 0.4
SPNS2-201ENST00000329078 FAM206AQ9NX38 181 aa17.54■□□□□ 0.4
SPNS2-201ENST00000329078 PTRH2Q9Y3E5 179 aaKnown RBP17.54■□□□□ 0.4
SPNS2-201ENST00000329078 CNOT1A5YKK6 2376 aaKnown RBP17.53■□□□□ 0.4
SPNS2-201ENST00000329078 TEX13DA0A0J9YY54 714 aaPredicted RBP17.53■□□□□ 0.4
SPNS2-201ENST00000329078 NDUFB7P17568 137 aa17.53■□□□□ 0.4
SPNS2-201ENST00000329078 CPEB2Q7Z5Q1 589 aaKnown RBP17.53■□□□□ 0.4
SPNS2-201ENST00000329078 OR5L2Q8NGL0 311 aa17.53■□□□□ 0.4
SPNS2-201ENST00000329078 ST8SIA1Q92185 356 aa17.53■□□□□ 0.4
SPNS2-201ENST00000329078 HDHD3Q9BSH5 251 aaPredicted RBP17.53■□□□□ 0.4
SPNS2-201ENST00000329078 PHF7Q9BWX1 381 aaPredicted RBP17.53■□□□□ 0.4
SPNS2-201ENST00000329078 NPIPA2E9PIF3 369 aa17.53■□□□□ 0.4
SPNS2-201ENST00000329078 NPIPA3F8WFD2 350 aa17.53■□□□□ 0.4
SPNS2-201ENST00000329078 ZNF735P0CB33 412 aa17.53■□□□□ 0.4
SPNS2-201ENST00000329078 CHRFAM7AQ494W8 412 aa17.53■□□□□ 0.4
SPNS2-201ENST00000329078 PNLDC1Q8NA58 520 aaKnown RBP17.53■□□□□ 0.4
SPNS2-201ENST00000329078 OR5AC2Q9NZP5 309 aa17.53■□□□□ 0.4
SPNS2-201ENST00000329078 B3GALT5Q9Y2C3 310 aa17.53■□□□□ 0.4
SPNS2-201ENST00000329078 IGFBP3P17936 291 aaPredicted RBP17.53■□□□□ 0.4
SPNS2-201ENST00000329078 SMAD4Q13485 552 aaKnown RBP17.53■□□□□ 0.4
SPNS2-201ENST00000329078 POM121Q96HA1 1249 aa17.53■□□□□ 0.4
SPNS2-201ENST00000329078 GPR27Q9NS67 375 aa17.53■□□□□ 0.4
SPNS2-201ENST00000329078 ALKBH4Q9NXW9 302 aa17.53■□□□□ 0.4
SPNS2-201ENST00000329078 SRPK3Q9UPE1 567 aa17.53■□□□□ 0.4
SPNS2-201ENST00000329078 ADAM10O14672 748 aa17.52■□□□□ 0.4
SPNS2-201ENST00000329078 IFNA4P05014 189 aa17.52■□□□□ 0.4
SPNS2-201ENST00000329078 MPPED2Q15777 294 aa17.52■□□□□ 0.4
SPNS2-201ENST00000329078 FAM166AQ6J272 317 aa17.52■□□□□ 0.4
SPNS2-201ENST00000329078 FAM24BQ8N5W8 94 aa17.52■□□□□ 0.4
SPNS2-201ENST00000329078 PIK3IP1Q96FE7 263 aa17.52■□□□□ 0.4
SPNS2-201ENST00000329078 AMDHD2Q9Y303 409 aa17.52■□□□□ 0.4
SPNS2-201ENST00000329078 PCDHGA1Q9Y5H4 931 aa17.52■□□□□ 0.4
SPNS2-201ENST00000329078 A0A1W2PPH5 198 aa17.52■□□□□ 0.4
SPNS2-201ENST00000329078 C9JQL5 133 aa17.52■□□□□ 0.4
SPNS2-201ENST00000329078 TLX3O43711 291 aaPredicted RBP17.52■□□□□ 0.4
SPNS2-201ENST00000329078 RPL7L1Q6DKI1 246 aaKnown RBP17.52■□□□□ 0.4
SPNS2-201ENST00000329078 ZSCAN4Q8NAM6 433 aaPredicted RBP17.52■□□□□ 0.4
SPNS2-201ENST00000329078 IP6K3Q96PC2 410 aa17.52■□□□□ 0.4
SPNS2-201ENST00000329078 GPR173Q9NS66 373 aa17.52■□□□□ 0.4
SPNS2-201ENST00000329078 WIF1Q9Y5W5 379 aa17.52■□□□□ 0.4
SPNS2-201ENST00000329078 GPR37O15354 613 aa17.52■□□□□ 0.39
SPNS2-201ENST00000329078 GATCO43716 136 aaKnown RBP17.52■□□□□ 0.39
SPNS2-201ENST00000329078 MMP16P51512 607 aa17.52■□□□□ 0.39
SPNS2-201ENST00000329078 FDX2Q6P4F2 183 aa17.52■□□□□ 0.39
SPNS2-201ENST00000329078 BEND4Q6ZU67 534 aa17.52■□□□□ 0.39
SPNS2-201ENST00000329078 UTP23Q9BRU9 249 aaKnown RBP17.52■□□□□ 0.39
SPNS2-201ENST00000329078 EIF5A2Q9GZV4 153 aaKnown RBP17.52■□□□□ 0.39
SPNS2-201ENST00000329078 OR51M1Q9H341 326 aa17.52■□□□□ 0.39
SPNS2-201ENST00000329078 NME2P1O60361 137 aa17.51■□□□□ 0.39
SPNS2-201ENST00000329078 CSNK1A1P48729 337 aa17.51■□□□□ 0.39
SPNS2-201ENST00000329078 ACY1Q03154 408 aa17.51■□□□□ 0.39
SPNS2-201ENST00000329078 HABP2Q14520 560 aaPredicted RBP17.51■□□□□ 0.39
SPNS2-201ENST00000329078 C6orf201Q7Z4U5 140 aa17.51■□□□□ 0.39
SPNS2-201ENST00000329078 EDARADDQ8WWZ3 215 aa17.51■□□□□ 0.39
SPNS2-201ENST00000329078 DYRK2Q92630 601 aa17.51■□□□□ 0.39
SPNS2-201ENST00000329078 ZNF385AQ96PM9 386 aaKnown RBP17.51■□□□□ 0.39
SPNS2-201ENST00000329078 LSM5Q9Y4Y9 91 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms