RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 OR2T27Q8NH04 317 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 GPR119Q8TDV5 335 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 LINC00615Q96LM1 132 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-201ENST00000328923 PRSS27Q9BQR3 290 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 NIPSNAP3BQ9BS92 247 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 SH3BGRL3Q9H299 93 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 CST9LQ9H4G1 147 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 HCFC1R1Q9NWW0 138 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 ZNF443Q9Y2A4 671 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-201ENST00000328923 MYO15AQ9UKN7 3530 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 LOC100289279A0A1B0GTE1 492 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 STK17BO94768 372 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 IFNA21P01568 189 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 SRP19P09132 144 aaKnown RBP10.51□□□□□ -0.73
SHMT2-201ENST00000328923 RPL12P30050 165 aaKnown RBP10.51□□□□□ -0.73
SHMT2-201ENST00000328923 TMEM241Q24JQ0 296 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 EIPR1Q53HC9 387 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 TMEM240Q5SV17 173 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 OR4C11Q6IEV9 310 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 UNQ5815/PRO19632Q6UWF5 114 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 PRSS57Q6UWY2 283 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 TOMM20LQ6UXN7 152 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 ZNF66Q6ZN08 573 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 WFDC8Q8IUA0 241 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 SLC26A10Q8NG04 563 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 NMNAT2Q9BZQ4 307 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 ZNF319Q9P2F9 582 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 KCNE3Q9Y6H6 103 aa10.51□□□□□ -0.73
SHMT2-201ENST00000328923 RBFOX3A6NFN3 312 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 ETV2O00321 342 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-201ENST00000328923 GOSR1O95249 250 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 GAPDHP04406 335 aaKnown RBP10.5□□□□□ -0.73
SHMT2-201ENST00000328923 FOLR1P15328 257 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 RND2P52198 227 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 ZNF260Q3ZCT1 412 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 PLPP4Q5VZY2 271 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 ERN2Q76MJ5 926 aaKnown RBP10.5□□□□□ -0.73
SHMT2-201ENST00000328923 FAM213BQ8TBF2 198 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 TMEM56Q96MV1 263 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 CCL26Q9Y258 94 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 TMEM56-RWDD3S4R434 201 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 TRBV24-1A0A075B6N3 115 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 IGHV2-70DA0A0C4DH43 119 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 A0A1B0GW64 132 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 CLEC3AO75596 197 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 MAKP20794 623 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 HSD11B1P28845 292 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 ACAA2P42765 397 aaKnown RBP10.5□□□□□ -0.73
SHMT2-201ENST00000328923 UBE2G2P60604 165 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 RND3P61587 244 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 PRSS8Q16651 343 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 ALG10BQ5I7T1 473 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 OPN5Q6U736 354 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 ZDHHC22Q8N966 263 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 MRPL43Q8N983 215 aaKnown RBP10.5□□□□□ -0.73
SHMT2-201ENST00000328923 ERGIC1Q969X5 290 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 RPUSD4Q96CM3 377 aaKnown RBP10.5□□□□□ -0.73
SHMT2-201ENST00000328923 ZG16BQ96DA0 208 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 PRRT1Q99946 306 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 CABLES2Q9BTV7 478 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 KIR3DX1Q9H7L2 352 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 TUBG2Q9NRH3 451 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 ICAM5Q9UMF0 924 aa10.5□□□□□ -0.73
SHMT2-201ENST00000328923 MYOFQ9NZM1 2061 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 TRAV39A0A0B4J263 110 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 AQP7P3A6NL99 342 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 CLDN34H7C241 214 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 CTSVO60911 334 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 ZIC2O95409 532 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-201ENST00000328923 APOBEC1P41238 236 aaKnown RBP10.49□□□□□ -0.73
SHMT2-201ENST00000328923 SSR2P43308 183 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 RABIFP47224 123 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 ARRB1P49407 418 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-201ENST00000328923 ZNF136P52737 540 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 COL9A2Q14055 689 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-201ENST00000328923 ENDOGQ14249 297 aaKnown RBP10.49□□□□□ -0.73
SHMT2-201ENST00000328923 C2orf76Q3KRA6 126 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 WDR25Q64LD2 544 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-201ENST00000328923 CMTM8Q8IZV2 173 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 OR2L13Q8N349 312 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 FAM174AQ8TBP5 190 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 TMEM239Q8WW34 195 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 MCHR2Q969V1 340 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 Q96M85 177 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 ANGPTL4Q9BY76 406 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 ZNF552Q9H707 407 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-201ENST00000328923 CLDND1Q9NY35 253 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 LIPGQ9Y5X9 500 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 COX11Q9Y6N1 276 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 CXCR1P25024 350 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 GRPRP30550 384 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 PTGER1P34995 402 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 AGERQ15109 404 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 SLC22A6Q4U2R8 563 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 DPY19L2P2Q6ZN68 376 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 SLC35F2Q8IXU6 374 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 COX18Q8N8Q8 333 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 TMEM37Q8WXS4 190 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 BPIFA2Q96DR5 249 aa10.49□□□□□ -0.73
SHMT2-201ENST00000328923 IL17FQ96PD4 163 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms