RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 OR5R1Q8NH85 324 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 FAM213BQ8TBF2 198 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 ABHD5Q8WTS1 349 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 C5orf34Q96MH7 638 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 WDR92Q96MX6 357 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 DGAT2Q96PD7 388 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 PRODH2Q9UF12 536 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 C14orf166Q9Y224 244 aaKnown RBP11.28□□□□□ -0.6
CCDC60-201ENST00000327554 NSG2Q9Y328 171 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 C5orf42Q9H799 3197 aa11.28□□□□□ -0.6
CCDC60-201ENST00000327554 H0YL77 283 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 TCAPO15273 167 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 CYB5BO43169 146 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 DXOO77932 396 aaKnown RBP11.27□□□□□ -0.61
CCDC60-201ENST00000327554 IGHMP01871 453 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 H2BFMP0C1H6 154 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 ZNF823P16415 610 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 IL2RGP31785 369 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 OR3A4PP47883 348 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 TAS2R46P59540 309 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 UBE2KP61086 200 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 RPS21P63220 83 aaKnown RBP11.27□□□□□ -0.61
CCDC60-201ENST00000327554 ACY1Q03154 408 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 ARFRP1Q13795 201 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 OR2T2Q6IF00 324 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 DEGS2Q6QHC5 323 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 PLXDC2Q6UX71 529 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 OR5AS1Q8N127 324 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 HSD17B11Q8NBQ5 300 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 OR5D14Q8NGL3 314 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 KCNG3Q8TAE7 436 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 M1APQ8TC57 530 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 SUCNR1Q9BXA5 334 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 TMEM59Q9BXS4 323 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 CENPMQ9NSP4 180 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 SLCO1B1Q9Y6L6 691 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 PTPRSQ13332 1948 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.27□□□□□ -0.61
CCDC60-201ENST00000327554 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.27□□□□□ -0.61
CCDC60-201ENST00000327554 A6NCN8 305 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 RBFOX3A6NFN3 312 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 GPR137BO60478 399 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 TRGC1P0CF51 173 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 DHPSP49366 369 aaPredicted RBP11.27□□□□□ -0.61
CCDC60-201ENST00000327554 SEC13P55735 322 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 RAB4BP61018 213 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 DLK1P80370 383 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 FMODQ06828 376 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 TMEM182Q6ZP80 229 aaPredicted RBP11.27□□□□□ -0.61
CCDC60-201ENST00000327554 RD3Q7Z3Z2 195 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 RNF133Q8WVZ7 376 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 FRZBQ92765 325 aa11.27□□□□□ -0.61
CCDC60-201ENST00000327554 LINC01553A4QN01 128 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 METTL12A8MUP2 240 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 IL33O95760 270 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 MT-ATP6P00846 226 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 IFNA21P01568 189 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 SRP19P09132 144 aaKnown RBP11.26□□□□□ -0.61
CCDC60-201ENST00000327554 TM4SF4P48230 202 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 AFF3P51826 1226 aaKnown RBP11.26□□□□□ -0.61
CCDC60-201ENST00000327554 CASP6P55212 293 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 FOXO1Q12778 655 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 ZNF385CQ66K41 422 aaPredicted RBP11.26□□□□□ -0.61
CCDC60-201ENST00000327554 SPSB3Q6PJ21 355 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 GALNTL5Q7Z4T8 443 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.26□□□□□ -0.61
CCDC60-201ENST00000327554 WDFY1Q8IWB7 410 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 PACRGQ96M98 296 aaPredicted RBP11.26□□□□□ -0.61
CCDC60-201ENST00000327554 PBOV1Q9GZY1 135 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 SLC25A31Q9H0C2 315 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 TCFL5Q9UL49 500 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 RCL1Q9Y2P8 373 aaKnown RBP11.26□□□□□ -0.61
CCDC60-201ENST00000327554 ATG2BQ96BY7 2078 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 CRYM-AS1A6NIL9 109 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 A8MWP6 167 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 ADAM10O14672 748 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 XRCC2O43543 280 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 NSA2O95478 260 aaKnown RBP11.26□□□□□ -0.61
CCDC60-201ENST00000327554 LINC00271P0C7V0 271 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 HLA-DOBP13765 273 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 DEFB110Q30KQ9 67 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 PSRC1Q6PGN9 363 aaPredicted RBP11.26□□□□□ -0.61
CCDC60-201ENST00000327554 RELTQ969Z4 430 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 HIST1H2BLQ99880 126 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 MRPL37Q9BZE1 423 aaKnown RBP11.26□□□□□ -0.61
CCDC60-201ENST00000327554 TCEAL2Q9H3H9 227 aaPredicted RBP11.26□□□□□ -0.61
CCDC60-201ENST00000327554 SIRT7Q9NRC8 400 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 PRTFDC1Q9NRG1 225 aa11.26□□□□□ -0.61
CCDC60-201ENST00000327554 IGKV1D-43A0A0B4J1Z2 117 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 PLPP3O14495 311 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 SNRPCP09234 159 aaKnown RBP11.25□□□□□ -0.61
CCDC60-201ENST00000327554 RNH1P13489 461 aaKnown RBP11.25□□□□□ -0.61
CCDC60-201ENST00000327554 GLIPR1P48060 266 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 RND3P61587 244 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 PPP1CAP62136 330 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 GPR157Q5UAW9 335 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 SGPP2Q8IWX5 399 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 AVL9Q8NBF6 648 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 OIT3Q8WWZ8 545 aa11.25□□□□□ -0.61
CCDC60-201ENST00000327554 CCDC3Q9BQI4 270 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms