RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 CPN1P15169 458 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 GPR12P47775 334 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 MESP2Q0VG99 397 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 ISXQ2M1V0 245 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 ZNF770Q6IQ21 691 aaPredicted RBP12.29□□□□□ -0.44
SPAST-201ENST00000315285 SSX9Q7RTT3 188 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 RXFP4Q8TDU9 374 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 TRIB1Q96RU8 372 aa12.29□□□□□ -0.44
SPAST-201ENST00000315285 NXF2Q9GZY0 626 aaKnown RBP12.29□□□□□ -0.44
SPAST-201ENST00000315285 GPR31O00270 319 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 RGS13O14921 159 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 SPINT1O43278 529 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 NDUFB7P17568 137 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 GPM6AP51674 278 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 RAB1AP62820 205 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 CLRN3Q8NCR9 226 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 SARAFQ96BY9 339 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 MTCH2Q9Y6C9 303 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 FIGNL2A6NMB9 653 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 HMSDA8MTL9 139 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 GCM2O75603 506 aaPredicted RBP12.28□□□□□ -0.44
SPAST-201ENST00000315285 INHBBP09529 407 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 OR3A4PP47883 348 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 FZD5Q13467 585 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 IL11RAQ14626 422 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 ZNF787Q6DD87 383 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 IL34Q6ZMJ4 242 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 Q7L0L9 218 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 BAGE3Q86Y29 109 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 BAGE2Q86Y30 109 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 PSENENQ9NZ42 101 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 CENPVL1A0A0U1RR11 272 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 OR4C45A6NMZ5 311 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 MPC2O95563 127 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 RPS23P62266 143 aaKnown RBP12.28□□□□□ -0.44
SPAST-201ENST00000315285 SIGIRRQ6IA17 410 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 ADPRHL1Q8NDY3 354 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 TRMT61AQ96FX7 289 aaKnown RBP12.28□□□□□ -0.44
SPAST-201ENST00000315285 ZPBPQ9BS86 351 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 SSUH2Q9Y2M2 353 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 PMS2P1A4D2B8 440 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 SLC22A20A6NK97 555 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 C5orf67F2Z3F1 127 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 CDC14BO60729 498 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 DUS4LO95620 317 aaKnown RBP12.28□□□□□ -0.44
SPAST-201ENST00000315285 ZNF687Q8N1G0 1237 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 GVQW1Q8N7I0 195 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 FBLIM1Q8WUP2 373 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 SPAG17Q6Q759 2223 aa12.28□□□□□ -0.44
SPAST-201ENST00000315285 A0A1W2PQD3 144 aa12.27□□□□□ -0.44
SPAST-201ENST00000315285 H3BP45 60 aa12.27□□□□□ -0.44
SPAST-201ENST00000315285 CST4P01036 141 aa12.27□□□□□ -0.44
SPAST-201ENST00000315285 ZNF391Q9UJN7 358 aa12.27□□□□□ -0.44
SPAST-201ENST00000315285 OSGIN2Q9Y236 505 aa12.27□□□□□ -0.44
SPAST-201ENST00000315285 PTPRFP10586 1907 aa12.27□□□□□ -0.44
SPAST-201ENST00000315285 CST7O76096 145 aa12.27□□□□□ -0.44
SPAST-201ENST00000315285 MGST1P10620 155 aaKnown RBP12.27□□□□□ -0.44
SPAST-201ENST00000315285 IL3RAP26951 378 aa12.27□□□□□ -0.44
SPAST-201ENST00000315285 AGFG1P52594 562 aaKnown RBP12.27□□□□□ -0.44
SPAST-201ENST00000315285 RHBDD2Q6NTF9 364 aa12.27□□□□□ -0.44
SPAST-201ENST00000315285 C6orf201Q7Z4U5 140 aa12.27□□□□□ -0.44
SPAST-201ENST00000315285 SCCPDHQ8NBX0 429 aa12.27□□□□□ -0.44
SPAST-201ENST00000315285 TMEM52Q8NDY8 209 aa12.27□□□□□ -0.44
SPAST-201ENST00000315285 OPA3Q9H6K4 179 aa12.27□□□□□ -0.44
SPAST-201ENST00000315285 NDRG3Q9UGV2 375 aa12.27□□□□□ -0.44
SPAST-201ENST00000315285 CYB5R1Q9UHQ9 305 aa12.27□□□□□ -0.44
SPAST-201ENST00000315285 LSM2Q9Y333 95 aaKnown RBP12.27□□□□□ -0.44
SPAST-201ENST00000315285 ZNF638Q14966 1978 aaKnown RBP12.27□□□□□ -0.45
SPAST-201ENST00000315285 H3BMH7 237 aa12.27□□□□□ -0.45
SPAST-201ENST00000315285 SULT1A3P0DMM9 295 aa12.27□□□□□ -0.45
SPAST-201ENST00000315285 SULT1A4P0DMN0 295 aa12.27□□□□□ -0.45
SPAST-201ENST00000315285 SLC37A1P57057 533 aa12.27□□□□□ -0.45
SPAST-201ENST00000315285 PDCD1Q15116 288 aa12.27□□□□□ -0.45
SPAST-201ENST00000315285 NAA40Q86UY6 237 aa12.27□□□□□ -0.45
SPAST-201ENST00000315285 C20orf196Q8IYI0 205 aa12.27□□□□□ -0.45
SPAST-201ENST00000315285 ZNF321PQ8N8H1 164 aa12.27□□□□□ -0.45
SPAST-201ENST00000315285 RNASEK-C17orf49H0YIS7 233 aa12.27□□□□□ -0.45
SPAST-201ENST00000315285 LINC01387J3KSC0 135 aa12.27□□□□□ -0.45
SPAST-201ENST00000315285 ADAM10O14672 748 aa12.27□□□□□ -0.45
SPAST-201ENST00000315285 TNFSF15O95150 251 aa12.27□□□□□ -0.45
SPAST-201ENST00000315285 APOA2P02652 100 aa12.27□□□□□ -0.45
SPAST-201ENST00000315285 CT45A8P0DMV1 189 aa12.27□□□□□ -0.45
SPAST-201ENST00000315285 CT45A9P0DMV2 189 aa12.27□□□□□ -0.45
SPAST-201ENST00000315285 SKP2Q13309 424 aa12.27□□□□□ -0.45
SPAST-201ENST00000315285 CT45A2Q5DJT8 189 aa12.27□□□□□ -0.45
SPAST-201ENST00000315285 ZNF774Q6NX45 483 aa12.27□□□□□ -0.45
SPAST-201ENST00000315285 OR4F5Q8NH21 305 aa12.27□□□□□ -0.45
SPAST-201ENST00000315285 ASB10Q8WXI3 467 aa12.27□□□□□ -0.45
SPAST-201ENST00000315285 OR4F4Q96R69 305 aa12.27□□□□□ -0.45
SPAST-201ENST00000315285 CRYAAP02489 173 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 HPXP02790 462 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 RAB32Q13637 225 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 SPATA46Q5T0L3 261 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 RPUSD4Q96CM3 377 aaKnown RBP12.26□□□□□ -0.45
SPAST-201ENST00000315285 AKR1E2Q96JD6 320 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 FAAP24Q9BTP7 215 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 ACTR3CQ9C0K3 210 aaPredicted RBP12.26□□□□□ -0.45
SPAST-201ENST00000315285 CT45A6P0DMU7 189 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 CT45A5P0DMU8 189 aa12.26□□□□□ -0.45
SPAST-201ENST00000315285 CT45A7P0DMV0 189 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms