RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 USF2Q15853 346 aaPredicted RBP12.01□□□□□ -0.49
RFFL-201ENST00000315249 C1QL3Q5VWW1 255 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 Q8IYB0 196 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 CNTNAP3Q9BZ76 1288 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 HES4Q9HCC6 221 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 TRAV38-1A0A0B4J264 116 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 CYR61O00622 381 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 EPHA2P29317 976 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 PRRX1P54821 245 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 ISL1P61371 349 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 TLE4Q04727 773 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 RIMKLAQ8IXN7 391 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 BSCL2Q96G97 398 aaPredicted RBP12.01□□□□□ -0.49
RFFL-201ENST00000315249 SIRT3Q9NTG7 399 aaPredicted RBP12.01□□□□□ -0.49
RFFL-201ENST00000315249 FLRT3Q9NZU0 649 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 TCRBV16S1A1N1A0A5B0 115 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 OR6C68A6NDL8 312 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 POM121CA8CG34 1229 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 TLE1Q04724 770 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 PEA15Q15121 130 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 ADAM5Q6NVV9 412 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 SLC25A21Q9BQT8 299 aaPredicted RBP12.01□□□□□ -0.49
RFFL-201ENST00000315249 OR5V1Q9UGF6 321 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 C9orf40Q8IXQ3 194 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 FAM58AQ8N1B3 248 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 OR8U1Q8NH10 309 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 DIDO1Q9BTC0 2240 aaKnown RBP12.01□□□□□ -0.49
RFFL-201ENST00000315249 TCRBV5S2A0A599 114 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 ELK1P19419 428 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 LTBRP36941 435 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 PCBP3P57721 371 aaKnown RBP12.01□□□□□ -0.49
RFFL-201ENST00000315249 KRTCAP3Q53RY4 240 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 CLEC2AQ6UVW9 174 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 SYS1Q8N2H4 156 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 NPEPL1Q8NDH3 523 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 CHODLQ9H9P2 273 aa12.01□□□□□ -0.49
RFFL-201ENST00000315249 NME2P22392 152 aa12□□□□□ -0.49
RFFL-201ENST00000315249 ETV6P41212 452 aa12□□□□□ -0.49
RFFL-201ENST00000315249 PSG6Q00889 435 aa12□□□□□ -0.49
RFFL-201ENST00000315249 C17orf107Q6ZR85 190 aa12□□□□□ -0.49
RFFL-201ENST00000315249 TMPRSS11FQ6ZWK6 438 aa12□□□□□ -0.49
RFFL-201ENST00000315249 NUFIP2Q7Z417 695 aaKnown RBP12□□□□□ -0.49
RFFL-201ENST00000315249 NRARPQ7Z6K4 114 aa12□□□□□ -0.49
RFFL-201ENST00000315249 TAAR6Q96RI8 345 aa12□□□□□ -0.49
RFFL-201ENST00000315249 GMDSO60547 372 aa12□□□□□ -0.49
RFFL-201ENST00000315249 PRF1P14222 555 aa12□□□□□ -0.49
RFFL-201ENST00000315249 GGTLC2Q14390 218 aa12□□□□□ -0.49
RFFL-201ENST00000315249 FAM27D1Q5T7N8 215 aa12□□□□□ -0.49
RFFL-201ENST00000315249 RHOUQ7L0Q8 258 aa12□□□□□ -0.49
RFFL-201ENST00000315249 TMEM105Q8N8V8 129 aa12□□□□□ -0.49
RFFL-201ENST00000315249 DPF1Q92782 380 aa12□□□□□ -0.49
RFFL-201ENST00000315249 SLC25A46Q96AG3 418 aa12□□□□□ -0.49
RFFL-201ENST00000315249 OR8B4Q96RC9 309 aa12□□□□□ -0.49
RFFL-201ENST00000315249 MTCH1Q9NZJ7 389 aa12□□□□□ -0.49
RFFL-201ENST00000315249 PUS1Q9Y606 427 aaKnown RBP eCLIP12□□□□□ -0.49
RFFL-201ENST00000315249 IGHV1-45A0A0A0MS14 117 aa12□□□□□ -0.49
RFFL-201ENST00000315249 FOXS1O43638 330 aa12□□□□□ -0.49
RFFL-201ENST00000315249 CRYZL1O95825 349 aa12□□□□□ -0.49
RFFL-201ENST00000315249 CEACAM6P40199 344 aa12□□□□□ -0.49
RFFL-201ENST00000315249 FABP5Q01469 135 aa12□□□□□ -0.49
RFFL-201ENST00000315249 GLCCI1Q86VQ1 547 aa12□□□□□ -0.49
RFFL-201ENST00000315249 CLDN23Q96B33 292 aa12□□□□□ -0.49
RFFL-201ENST00000315249 ZNF416Q9BWM5 594 aa12□□□□□ -0.49
RFFL-201ENST00000315249 FAM212BQ9NTI7 297 aaPredicted RBP12□□□□□ -0.49
RFFL-201ENST00000315249 ANKRD36A6QL64 1941 aa12□□□□□ -0.49
RFFL-201ENST00000315249 IGHV3-43A0A0B4J1X8 118 aa12□□□□□ -0.49
RFFL-201ENST00000315249 IGHV3-43DP0DP04 118 aa12□□□□□ -0.49
RFFL-201ENST00000315249 PSD2Q9BQI7 771 aa12□□□□□ -0.49
RFFL-201ENST00000315249 SEC22CQ9BRL7 303 aa12□□□□□ -0.49
RFFL-201ENST00000315249 FER1L5A0AVI2 2057 aa12□□□□□ -0.49
RFFL-201ENST00000315249 ST8SIA5O15466 376 aa12□□□□□ -0.49
RFFL-201ENST00000315249 TCRBP04435 133 aa12□□□□□ -0.49
RFFL-201ENST00000315249 ASCL1P50553 236 aa12□□□□□ -0.49
RFFL-201ENST00000315249 ETFDHQ16134 617 aa12□□□□□ -0.49
RFFL-201ENST00000315249 CHCHD2P9Q5T1J5 151 aaPredicted RBP12□□□□□ -0.49
RFFL-201ENST00000315249 UBE3DQ7Z6J8 389 aa12□□□□□ -0.49
RFFL-201ENST00000315249 ZBTB25P24278 435 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 CDKN2AP42771 156 aaKnown RBP11.99□□□□□ -0.49
RFFL-201ENST00000315249 KISS1Q15726 138 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 Q56UQ5 140 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 CMPK2Q5EBM0 449 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 HSD17B11Q8NBQ5 300 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 OR2M3Q8NG83 312 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 DOCK9Q9BZ29 2069 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 DHRS3O75911 302 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 PIGPP57054 158 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 TMEM268Q5VZI3 342 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 MOGAT3Q86VF5 341 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 ARRDC5A6NEK1 342 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 PRSS44E7EML9 344 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 SKP2Q13309 424 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 ZFP62Q8NB50 900 aaPredicted RBP11.99□□□□□ -0.49
RFFL-201ENST00000315249 OR6X1Q8NH79 312 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 EXOSC3Q9NQT5 275 aaKnown RBP11.99□□□□□ -0.49
RFFL-201ENST00000315249 SIX6O95475 246 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 AARDQ4LEZ3 155 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 BPIFCQ8NFQ6 507 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 OR5D13Q8NGL4 314 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 ASB10Q8WXI3 467 aa11.99□□□□□ -0.49
RFFL-201ENST00000315249 ACY3Q96HD9 319 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms