RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 OR1A1Q9P1Q5 309 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 RALYQ9UKM9 306 aaKnown RBP13.99□□□□□ -0.17
HCFC1-201ENST00000310441 FLVCR2Q9UPI3 526 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 TMEM40Q8WWA1 233 aa13.99□□□□□ -0.17
HCFC1-201ENST00000310441 TAPBPO15533 448 aa13.98□□□□□ -0.17
HCFC1-201ENST00000310441 CDK5R1Q15078 307 aa13.98□□□□□ -0.17
HCFC1-201ENST00000310441 PNLIPRP2P54317 469 aa13.98□□□□□ -0.17
HCFC1-201ENST00000310441 RPL18Q07020 188 aaKnown RBP13.98□□□□□ -0.17
HCFC1-201ENST00000310441 Q56UQ5 140 aa13.98□□□□□ -0.17
HCFC1-201ENST00000310441 ZBTB44Q8NCP5 570 aa13.98□□□□□ -0.17
HCFC1-201ENST00000310441 DDX60LQ5H9U9 1706 aaKnown RBP13.98□□□□□ -0.17
HCFC1-201ENST00000310441 TMEM65Q6PI78 240 aa13.98□□□□□ -0.17
HCFC1-201ENST00000310441 RAB24Q969Q5 203 aa13.98□□□□□ -0.17
HCFC1-201ENST00000310441 EPXP11678 715 aa13.98□□□□□ -0.17
HCFC1-201ENST00000310441 CEACAM3P40198 252 aa13.98□□□□□ -0.17
HCFC1-201ENST00000310441 ZNF121P58317 390 aaPredicted RBP13.98□□□□□ -0.17
HCFC1-201ENST00000310441 AANATQ16613 207 aa13.98□□□□□ -0.17
HCFC1-201ENST00000310441 ZNF768Q9H5H4 540 aaKnown RBP13.98□□□□□ -0.17
HCFC1-201ENST00000310441 TRAV20A0A0B4J274 112 aa13.98□□□□□ -0.17
HCFC1-201ENST00000310441 SLC22A20A6NK97 555 aa13.98□□□□□ -0.17
HCFC1-201ENST00000310441 GPNMBQ14956 572 aa13.98□□□□□ -0.17
HCFC1-201ENST00000310441 CGB2Q6NT52 195 aa13.98□□□□□ -0.17
HCFC1-201ENST00000310441 TP53INP2Q8IXH6 220 aa13.98□□□□□ -0.17
HCFC1-201ENST00000310441 AKR7LQ8NHP1 331 aa13.98□□□□□ -0.17
HCFC1-201ENST00000310441 FUNDC1Q8IVP5 155 aa13.98□□□□□ -0.17
HCFC1-201ENST00000310441 CLDN34H7C241 214 aa13.98□□□□□ -0.17
HCFC1-201ENST00000310441 MBPP02686 304 aaPredicted RBP13.98□□□□□ -0.17
HCFC1-201ENST00000310441 SCGB1D4Q6XE38 83 aa13.98□□□□□ -0.17
HCFC1-201ENST00000310441 ACY3Q96HD9 319 aa13.98□□□□□ -0.17
HCFC1-201ENST00000310441 LSM11P83369 360 aaKnown RBP eCLIP13.97□□□□□ -0.173e-6■□□□□ 9.5
HCFC1-201ENST00000310441 HSD17B13Q7Z5P4 300 aaPredicted RBP13.97□□□□□ -0.17
HCFC1-201ENST00000310441 SEMA7AO75326 666 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 FAM87AP0C7U9 286 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 CSNK1EP49674 416 aaKnown RBP13.97□□□□□ -0.17
HCFC1-201ENST00000310441 TCTAP57738 103 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 ELFN2Q5R3F8 820 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 NUFIP2Q7Z417 695 aaKnown RBP13.97□□□□□ -0.17
HCFC1-201ENST00000310441 OR5R1Q8NH85 324 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 M0R1X1 148 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 GPR3P46089 330 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 RPL30P62888 115 aaKnown RBP13.97□□□□□ -0.17
HCFC1-201ENST00000310441 KLF7O75840 302 aaPredicted RBP13.97□□□□□ -0.17
HCFC1-201ENST00000310441 FUT3P21217 361 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 UQCRFS1P47985 274 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.97□□□□□ -0.176e-8■■■□□ 14.6
HCFC1-201ENST00000310441 FIZ1Q96SL8 496 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 BCL2L10Q9HD36 194 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 ZNF195O14628 629 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 LANCL1O43813 399 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 CD200P41217 278 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 MICBQ29980 383 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 MS4A6EQ96DS6 147 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 DNAJC25-GNG10A0A024R161 153 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 F5H697 171 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 BCL3P20749 454 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 OPRM1P35372 400 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 KIAA1958Q8N8K9 716 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 RDH5Q92781 318 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 ZNF426Q9BUY5 554 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 P4HTMQ9NXG6 502 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 IGLV3-10A0A075B6K4 115 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 CBR3O75828 277 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 CLLU1Q5K131 121 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 TAS1R1Q7RTX1 841 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 TMEM208Q9BTX3 173 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 TMEM167BQ9NRX6 74 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 CA10Q9NS85 328 aa13.97□□□□□ -0.17
HCFC1-201ENST00000310441 GPANK1O95872 356 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 GLDNQ6ZMI3 551 aaPredicted RBP13.96□□□□□ -0.17
HCFC1-201ENST00000310441 TUSC5Q8IXB3 177 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 RCL1Q9Y2P8 373 aaKnown RBP13.96□□□□□ -0.17
HCFC1-201ENST00000310441 ANK1P16157 1881 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 IDSB3KWA1 339 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 PPP6CO00743 305 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 NEURL1O76050 574 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 SLC25A5P05141 298 aaKnown RBP13.96□□□□□ -0.17
HCFC1-201ENST00000310441 C21orf58P58505 322 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 NTHL1P78549 312 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 OR1C1Q15619 314 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 MARCH1Q8TCQ1 289 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 FUT7Q11130 342 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 C11orf91Q3C1V1 193 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 OR1L3Q8NH93 324 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 TMEM191AQ9H0A3 160 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 ONECUT1Q9UBC0 465 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 POMT2Q9UKY4 750 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 BCORQ6W2J9 1755 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 DNASE2O00115 360 aaPredicted RBP13.96□□□□□ -0.17
HCFC1-201ENST00000310441 G6PCP35575 357 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 OR1D5P58170 312 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 RBPMS2Q6ZRY4 209 aaKnown RBP13.96□□□□□ -0.17
HCFC1-201ENST00000310441 ADPRHL1Q8NDY3 354 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 PCNPQ8WW12 178 aaKnown RBP13.96□□□□□ -0.17
HCFC1-201ENST00000310441 COL11A1P12107 1806 aaPredicted RBP13.96□□□□□ -0.17
HCFC1-201ENST00000310441 PCSK6P29122 969 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 DSCR4P56555 118 aaPredicted RBP13.96□□□□□ -0.17
HCFC1-201ENST00000310441 MYPOPQ86VE0 399 aaPredicted RBP13.96□□□□□ -0.17
HCFC1-201ENST00000310441 PDPNQ86YL7 162 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 NOXO1Q8NFA2 376 aa13.96□□□□□ -0.17
HCFC1-201ENST00000310441 OR2G2Q8NGZ5 317 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms