RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 FCRL6Q6DN72 434 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 ANKRD16Q6P6B7 361 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 DRAM2Q6UX65 266 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 RFLNAQ6ZTI6 216 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 SLC35B3Q9H1N7 401 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 GNB4Q9HAV0 340 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 MSL2Q9HCI7 577 aa7.37□□□□□ -1.23
VPS41-202ENST00000310301 FGF20Q9NP95 211 aaPredicted RBP7.37□□□□□ -1.23
VPS41-202ENST00000310301 KIAA1324LA8MWY0 1029 aaPredicted RBP7.36□□□□□ -1.23
VPS41-202ENST00000310301 CST4P01036 141 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 WNT1P04628 370 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 GRPP07492 148 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 AMTP48728 403 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 TPBGQ13641 420 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 FAM27D1Q5T7N8 215 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 PRAMEF20Q5VT98 475 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 C1orf140Q5VVS0 124 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 XAF1Q6GPH4 301 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 LCORQ96JN0 433 aaPredicted RBP7.36□□□□□ -1.23
VPS41-202ENST00000310301 RIMS4Q9H426 269 aaPredicted RBP7.36□□□□□ -1.23
VPS41-202ENST00000310301 SLC25A19Q9HC21 320 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 TCRBV5S1A1TA0A578 114 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 LNP1A1A4G5 178 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 ARPC3O15145 178 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 OR2J2O76002 312 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 TSPAN12O95859 305 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 CD200P41217 278 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 RBP2P50120 134 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 ASCL1P50553 236 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 DGAT2L6Q6ZPD8 337 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 GRINAQ7Z429 371 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 SYS1Q8N2H4 156 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 GPR32P1Q8NGA4 272 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 BLNKQ8WV28 456 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 PATE1Q8WXA2 126 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 EXTL1Q92935 676 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 TINAGL1Q9GZM7 467 aaPredicted RBP7.36□□□□□ -1.23
VPS41-202ENST00000310301 NRSN2Q9GZP1 204 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 GSX1Q9H4S2 264 aaPredicted RBP7.36□□□□□ -1.23
VPS41-202ENST00000310301 NAT8BQ9UHF3 227 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 WSB1Q9Y6I7 421 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 UBE2L5PA0A1B0GUS4 154 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 TCF21O43680 179 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 ACAA1P09110 424 aaPredicted RBP7.36□□□□□ -1.23
VPS41-202ENST00000310301 DIO1P49895 249 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 DHODHQ02127 395 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 NHLH1Q02575 133 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 NHLH2Q02577 135 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 SSBP1Q04837 148 aaKnown RBP7.36□□□□□ -1.23
VPS41-202ENST00000310301 C17orf67Q0P5P2 114 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 C19orf57Q0VDD7 668 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 OR8B8Q15620 311 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 OR51F2Q8NH61 342 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 CCL4L1Q8NHW4 92 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 DDA1Q9BW61 102 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 DYNLRB1Q9NP97 96 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 FSCN3Q9NQT6 498 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 B3GAT1Q9P2W7 334 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 COL11A1P12107 1806 aaPredicted RBP7.36□□□□□ -1.23
VPS41-202ENST00000310301 TRAV1-2A0A0B4J238 106 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 TCRBV16S1A1N1A0A5B0 115 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 ZNF814B7Z6K7 855 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 SPINK4O60575 86 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 CST7O76096 145 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 MT-ATP6P00846 226 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 ENPP1P22413 925 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 GFERP55789 205 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 CBLN2Q8IUK8 224 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 PACRGQ96M98 296 aaPredicted RBP7.36□□□□□ -1.23
VPS41-202ENST00000310301 BARX1Q9HBU1 254 aaPredicted RBP7.36□□□□□ -1.23
VPS41-202ENST00000310301 LYRM4Q9HD34 91 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 CYSLTR2Q9NS75 346 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 OR1A1Q9P1Q5 309 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 KNTC1P50748 2209 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 PLPP1O14494 284 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 WDR1O75083 606 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 NDUFB6O95139 128 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 OR5H8P0DN80 308 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 RPL11P62913 178 aaKnown RBP7.36□□□□□ -1.23
VPS41-202ENST00000310301 EGR3Q06889 387 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 DUSP5Q16690 384 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 GSG1Q2KHT4 349 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 PRTGQ2VWP7 1150 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 TMEM128Q5BJH2 165 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 BHLHE23Q8NDY6 225 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 H1FXQ92522 213 aaKnown RBP7.36□□□□□ -1.23
VPS41-202ENST00000310301 SLAMF6Q96DU3 332 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 LRRC3BQ96PB8 259 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 STACQ99469 402 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 IKZF5Q9H5V7 419 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 CALHM2Q9HA72 323 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 ADGRL4Q9HBW9 690 aa7.36□□□□□ -1.23
VPS41-202ENST00000310301 FZD6O60353 706 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 GUSBP08236 651 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 ZNF250P15622 560 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 GPM6AP51674 278 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 PKIAP61925 76 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 OR5I1Q13606 314 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 TMEM241Q24JQ0 296 aa7.35□□□□□ -1.23
VPS41-202ENST00000310301 CCSMST1Q4G0I0 132 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms