RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 ANKRD10Q9NXR5 420 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 SIP14410 1827 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 USF3Q68DE3 2245 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 J3QR89 54 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 SLC31A2O15432 143 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 SLC35A2P78381 396 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 ACOT7LQ6ZUV0 252 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 FAM219AQ8IW50 185 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 ADGRF3Q8IZF5 1079 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 OR4C3Q8NH37 302 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 RPL3LQ92901 407 aaKnown RBP2.86□□□□□ -1.95
CLOCK-201ENST00000309964 NMES1Q9C002 83 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 ACKR4Q9NPB9 350 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 TXNL4BQ9NX01 149 aaKnown RBP2.86□□□□□ -1.95
CLOCK-201ENST00000309964 INSIG2Q9Y5U4 225 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 ZAR1LA6NP61 321 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 SPI1P17947 270 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 KIR2DL1P43626 348 aaPredicted RBP2.86□□□□□ -1.95
CLOCK-201ENST00000309964 TMEM236Q5W0B7 351 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 NANOGP1Q8N7R0 232 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 OR4F17Q8NGA8 305 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 OR4F5Q8NH21 305 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 TMEM255BQ8WV15 326 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 APH1BQ8WW43 257 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 GIMAP1Q8WWP7 306 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 OR4F4Q96R69 305 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 ADAT1Q9BUB4 502 aaKnown RBP2.86□□□□□ -1.95
CLOCK-201ENST00000309964 TMEM147Q9BVK8 224 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 TTTY10Q9BZA0 68 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 FGF20Q9NP95 211 aaPredicted RBP2.86□□□□□ -1.95
CLOCK-201ENST00000309964 MIOXQ9UGB7 285 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 COLQQ9Y215 455 aaPredicted RBP2.86□□□□□ -1.95
CLOCK-201ENST00000309964 PTGDR2Q9Y5Y4 395 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 LOC107986453A0A1B0GWG9 222 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 H3BSH0 61 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 BOLA2-SMG1P6H3BVE0 249 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 SLC17A2O00624 439 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 PRF1P14222 555 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 CSRP1P21291 193 aaKnown RBP2.86□□□□□ -1.95
CLOCK-201ENST00000309964 MRPS34P82930 218 aaKnown RBP2.86□□□□□ -1.95
CLOCK-201ENST00000309964 ETFDHQ16134 617 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 NRN1LQ496H8 165 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 ZNF658BQ4V348 819 aaPredicted RBP2.86□□□□□ -1.95
CLOCK-201ENST00000309964 OR4S1Q8NGB4 309 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 OR5A2Q8NGI9 324 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 BSCL2Q96G97 398 aaPredicted RBP2.86□□□□□ -1.95
CLOCK-201ENST00000309964 MAP6Q96JE9 813 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 CXorf58Q96LI9 332 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 TMEM204Q9BSN7 226 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 ZNF395Q9H8N7 513 aaPredicted RBP2.86□□□□□ -1.95
CLOCK-201ENST00000309964 PLEKHB1Q9UF11 243 aaPredicted RBP2.86□□□□□ -1.95
CLOCK-201ENST00000309964 GPR31O00270 319 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 CCL21O00585 134 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 ADAM10O14672 748 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 PLPP2O43688 288 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 TOXO94900 526 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 CAPNS1P04632 268 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 ACP1P24666 158 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 COL19A1Q14993 1142 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 EBPQ15125 230 aaKnown RBP2.86□□□□□ -1.95
CLOCK-201ENST00000309964 TESK1Q15569 626 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 KCNMB1Q16558 191 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 CALHM1Q8IU99 346 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 PHC2Q8IXK0 858 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 OR10G3Q8NGC4 313 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 LILRB4Q8NHJ6 448 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 FAM216AQ8WUB2 273 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 ST8SIA2Q92186 375 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 TMEM131Q92545 1883 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 FBXO17Q96EF6 278 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 SDSLQ96GA7 329 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 SYNPO2LQ9H987 977 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 ERRFI1Q9UJM3 462 aaPredicted RBP2.86□□□□□ -1.95
CLOCK-201ENST00000309964 EMCNQ9ULC0 261 aa2.86□□□□□ -1.95
CLOCK-201ENST00000309964 SF3B6Q9Y3B4 125 aaKnown RBP2.86□□□□□ -1.95
CLOCK-201ENST00000309964 IGHV5-51A0A0C4DH38 117 aa2.85□□□□□ -1.95
CLOCK-201ENST00000309964 IGHV5-10-1A0A0J9YXX1 117 aa2.85□□□□□ -1.95
CLOCK-201ENST00000309964 LCMT2O60294 686 aaKnown RBP2.85□□□□□ -1.95
CLOCK-201ENST00000309964 FAM106CPP0CH98 169 aa2.85□□□□□ -1.95
CLOCK-201ENST00000309964 TNFRSF1BP20333 461 aa2.85□□□□□ -1.95
CLOCK-201ENST00000309964 ID1P41134 155 aa2.85□□□□□ -1.95
CLOCK-201ENST00000309964 DUSP2Q05923 314 aa2.85□□□□□ -1.95
CLOCK-201ENST00000309964 ANKRD37Q7Z713 158 aa2.85□□□□□ -1.95
CLOCK-201ENST00000309964 NPRL2Q8WTW4 380 aa2.85□□□□□ -1.95
CLOCK-201ENST00000309964 WNT2BQ93097 391 aa2.85□□□□□ -1.95
CLOCK-201ENST00000309964 TAF9BQ9HBM6 251 aa2.85□□□□□ -1.95
CLOCK-201ENST00000309964 LPAR2Q9HBW0 351 aa2.85□□□□□ -1.95
CLOCK-201ENST00000309964 SLC22A13Q9Y226 551 aa2.85□□□□□ -1.95
CLOCK-201ENST00000309964 MEIOCA2RUB1 952 aa2.85□□□□□ -1.95
CLOCK-201ENST00000309964 DNASE2O00115 360 aaPredicted RBP2.85□□□□□ -1.95
CLOCK-201ENST00000309964 CTSLP07711 333 aa2.85□□□□□ -1.95
CLOCK-201ENST00000309964 HOXB5P09067 269 aa2.85□□□□□ -1.95
CLOCK-201ENST00000309964 LIMS3P0CW19 117 aa2.85□□□□□ -1.95
CLOCK-201ENST00000309964 LIMS4P0CW20 117 aa2.85□□□□□ -1.95
CLOCK-201ENST00000309964 GIFP27352 417 aa2.85□□□□□ -1.95
CLOCK-201ENST00000309964 S100A11P31949 105 aa2.85□□□□□ -1.95
CLOCK-201ENST00000309964 PTGFRP43088 359 aa2.85□□□□□ -1.95
CLOCK-201ENST00000309964 NUTF2P61970 127 aaKnown RBP2.85□□□□□ -1.95
CLOCK-201ENST00000309964 IAH1Q2TAA2 248 aaPredicted RBP2.85□□□□□ -1.95
CLOCK-201ENST00000309964 IL34Q6ZMJ4 242 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms