RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 PADI1Q9ULC6 663 aa9.13□□□□□ -0.95
APOBEC3F-201ENST00000308521 VDAC3Q9Y277 283 aa9.13□□□□□ -0.95
APOBEC3F-201ENST00000308521 GVINP1Q7Z2Y8 2422 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 C9orf172C9J069 976 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 XKRYO14609 159 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 ZFAND5O76080 213 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 DUS4LO95620 317 aaKnown RBP9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 ACTL6AO96019 429 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 F10P00742 488 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 BGLAPP02818 100 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 OPN1LWP04000 364 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 CRHP06850 196 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 HCKP08631 526 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 NQO2P16083 231 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 RAB5AP20339 215 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 CYCSP99999 105 aaKnown RBP9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 ZNF260Q3ZCT1 412 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 OR52W1Q6IF63 320 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 BAP18Q8IXM2 172 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 PAQR4Q8N4S7 273 aaPredicted RBP9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 NKAIN3Q8N8D7 197 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 OR4K17Q8NGC6 315 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 SAT2Q96F10 170 aaPredicted RBP9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 SLC25A44Q96H78 314 aaPredicted RBP9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 NMES1Q9C002 83 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 STRADBQ9C0K7 418 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 LAT2Q9GZY6 243 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 ZNF160Q9HCG1 818 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 C19orf25Q9UFG5 118 aaPredicted RBP9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 MFNGO00587 321 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 EFSO43281 561 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 SRSF10O75494 262 aaKnown RBP9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 TBPP20226 339 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 CX3CR1P49238 355 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 MFGE8Q08431 387 aaPredicted RBP9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 MOGAT2Q3SYC2 334 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 PRAMEF20Q5VT98 475 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 UNQ6126/PRO20091Q6UXV3 157 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 FJX1Q86VR8 437 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 BOLLQ8N9W6 283 aaKnown RBP9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 OR2Y1Q8NGV0 311 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 S100PBPQ96BU1 408 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 NOL4LQ96MY1 436 aaPredicted RBP9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 S100A13Q99584 98 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 OR11A1Q9GZK7 315 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 WDR54Q9H977 334 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 CYTL1Q9NRR1 136 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 MRPL22Q9NWU5 206 aaKnown RBP9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 KLRF1Q9NZS2 232 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 CGGBP1Q9UFW8 167 aaPredicted RBP9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 GDF2Q9UK05 429 aaPredicted RBP9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 HHLA2Q9UM44 414 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 RHBDD3Q9Y3P4 386 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 KPTNQ9Y664 436 aa9.12□□□□□ -0.95
APOBEC3F-201ENST00000308521 IGHV1-45A0A0A0MS14 117 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 IGLV1-36A0A0B4J1U3 117 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 A0A1W2PPE3 182 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 PRSS37A4D1T9 235 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 TMEM235A6NFC5 223 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 B4E171 279 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 G3V3Y1 287 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 MT-CO3P00414 261 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 SERPINA5P05154 406 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 ISG15P05161 165 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 COX6A1P12074 109 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 SLC6A8P48029 635 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 SLC6A9P48067 706 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 DNASE1L1P49184 302 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 TAS2R31P59538 309 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 C21orf62-AS1Q17RA5 79 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 HES3Q5TGS1 186 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 OR10K2Q6IF99 312 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 SLC35D2Q76EJ3 337 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 OR4S1Q8NGB4 309 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 NUBPLQ8TB37 319 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 ZNF519Q8TB69 540 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 PAQR8Q8TEZ7 354 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 PPP1R14AQ96A00 147 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 RASL10BQ96S79 203 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 BCO1Q9HAY6 547 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 TMED7Q9Y3B3 224 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 TIMM10BQ9Y5J6 103 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 COL27A1Q8IZC6 1860 aaPredicted RBP9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 KMT2EQ8IZD2 1858 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 TRAV36DV7A0A075B6V5 113 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 SCGNO76038 276 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 OR6A2O95222 327 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 HLA-DQA2P01906 255 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 LINC00614P0C842 121 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 FAM157CP0CG43 387 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 LYL1P12980 280 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 PGAM2P15259 253 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 CXCR1P25024 350 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 NFYBP25208 207 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 FOLR3P41439 243 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 RPL27P61353 136 aaKnown RBP9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 GAGE1Q13065 139 aa9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 AIMP2Q13155 320 aaKnown RBP9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 TRIP6Q15654 476 aaKnown RBP9.11□□□□□ -0.95
APOBEC3F-201ENST00000308521 NSUN5P2Q63ZY6 315 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms