RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 ADPRHL1Q8NDY3 354 aa13.27□□□□□ -0.28
CSDC2-201ENST00000306149 OR51F2Q8NH61 342 aa13.27□□□□□ -0.28
CSDC2-201ENST00000306149 ADAT1Q9BUB4 502 aaKnown RBP13.27□□□□□ -0.28
CSDC2-201ENST00000306149 METTL8Q9H825 291 aaKnown RBP13.27□□□□□ -0.28
CSDC2-201ENST00000306149 OR2S2Q9NQN1 319 aa13.27□□□□□ -0.28
CSDC2-201ENST00000306149 MMP26Q9NRE1 261 aa13.27□□□□□ -0.28
CSDC2-201ENST00000306149 ZNF629Q9UEG4 869 aaPredicted RBP13.27□□□□□ -0.28
CSDC2-201ENST00000306149 CCL3P10147 92 aa13.27□□□□□ -0.29
CSDC2-201ENST00000306149 CCL1P22362 96 aa13.27□□□□□ -0.29
CSDC2-201ENST00000306149 FPR2P25090 351 aa13.27□□□□□ -0.29
CSDC2-201ENST00000306149 EPHA8P29322 1005 aaPredicted RBP13.27□□□□□ -0.29
CSDC2-201ENST00000306149 GUCA1AP43080 201 aaPredicted RBP13.27□□□□□ -0.29
CSDC2-201ENST00000306149 STARD6P59095 220 aa13.27□□□□□ -0.29
CSDC2-201ENST00000306149 SRSF3P84103 164 aaKnown RBP13.27□□□□□ -0.29
CSDC2-201ENST00000306149 NKAPLQ5M9Q1 402 aa13.27□□□□□ -0.29
CSDC2-201ENST00000306149 PRSS54Q6PEW0 395 aa13.27□□□□□ -0.29
CSDC2-201ENST00000306149 DRAM2Q6UX65 266 aa13.27□□□□□ -0.29
CSDC2-201ENST00000306149 FADS6Q8N9I5 356 aa13.27□□□□□ -0.29
CSDC2-201ENST00000306149 SLC39A7Q92504 469 aa13.27□□□□□ -0.29
CSDC2-201ENST00000306149 OCSTAMPQ9BR26 566 aa13.27□□□□□ -0.29
CSDC2-201ENST00000306149 HDHD3Q9BSH5 251 aaPredicted RBP13.27□□□□□ -0.29
CSDC2-201ENST00000306149 ACKR4Q9NPB9 350 aa13.27□□□□□ -0.29
CSDC2-201ENST00000306149 ZNF701Q9NV72 531 aaPredicted RBP13.27□□□□□ -0.29
CSDC2-201ENST00000306149 TLX3O43711 291 aaPredicted RBP13.26□□□□□ -0.29
CSDC2-201ENST00000306149 ZNF205O95201 554 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 HPNP05981 417 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 SLC35A1P78382 337 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 FAM189A2Q15884 450 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 IL34Q6ZMJ4 242 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 C6orf201Q7Z4U5 140 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 SSC4DQ8WTU2 575 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 PIGLQ9Y2B2 252 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 HDGFL3Q9Y3E1 203 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 H7C2Y5 167 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 PNLIPP16233 465 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 GABRR1P24046 479 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 CBX5P45973 191 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 GRB2P62993 217 aaKnown RBP13.26□□□□□ -0.29
CSDC2-201ENST00000306149 ENDOGQ14249 297 aaKnown RBP13.26□□□□□ -0.29
CSDC2-201ENST00000306149 KCNMB1Q16558 191 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 PLEKHN1Q494U1 663 aaPredicted RBP13.26□□□□□ -0.29
CSDC2-201ENST00000306149 HAGHLQ6PII5 290 aaPredicted RBP13.26□□□□□ -0.29
CSDC2-201ENST00000306149 PNLDC1Q8NA58 520 aaKnown RBP13.26□□□□□ -0.29
CSDC2-201ENST00000306149 NAXEQ8NCW5 288 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 SCGB3A2Q96PL1 93 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 AQP10Q96PS8 301 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 ZNF581Q9P0T4 197 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 C19orf25Q9UFG5 118 aaPredicted RBP13.26□□□□□ -0.29
CSDC2-201ENST00000306149 FAM157CP0CG43 387 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 MSR1P21757 451 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 ECH1Q13011 328 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 RAB32Q13637 225 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 PCOLCEQ15113 449 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 DHRS7BQ6IAN0 325 aaPredicted RBP13.26□□□□□ -0.29
CSDC2-201ENST00000306149 MRPL14Q6P1L8 145 aaKnown RBP13.26□□□□□ -0.29
CSDC2-201ENST00000306149 LHFPL1Q86WI0 220 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 OR4A4PQ8NGN8 299 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 TMEM231Q9H6L2 316 aa13.26□□□□□ -0.29
CSDC2-201ENST00000306149 TNRC18O15417 2968 aaPredicted RBP13.25□□□□□ -0.29
CSDC2-201ENST00000306149 TP53I11O14683 189 aa13.25□□□□□ -0.29
CSDC2-201ENST00000306149 EIF1P41567 113 aaKnown RBP13.25□□□□□ -0.29
CSDC2-201ENST00000306149 OR2AE1Q8NHA4 323 aa13.25□□□□□ -0.29
CSDC2-201ENST00000306149 SLC25A43Q8WUT9 341 aaPredicted RBP13.25□□□□□ -0.29
CSDC2-201ENST00000306149 CNTNAP3BQ96NU0 1288 aa13.25□□□□□ -0.29
CSDC2-201ENST00000306149 PECRQ9BY49 303 aa13.25□□□□□ -0.29
CSDC2-201ENST00000306149 PLEK2Q9NYT0 353 aa13.25□□□□□ -0.29
CSDC2-201ENST00000306149 F8W036 122 aa13.25□□□□□ -0.29
CSDC2-201ENST00000306149 S100A10P60903 97 aa13.25□□□□□ -0.29
CSDC2-201ENST00000306149 BLOC1S1P78537 153 aa13.25□□□□□ -0.29
CSDC2-201ENST00000306149 H3F3AP84243 136 aa13.25□□□□□ -0.29
CSDC2-201ENST00000306149 CHAF1BQ13112 559 aa13.25□□□□□ -0.29
CSDC2-201ENST00000306149 SNAI3Q3KNW1 292 aa13.25□□□□□ -0.29
CSDC2-201ENST00000306149 TMEM88Q6PEY1 159 aa13.25□□□□□ -0.29
CSDC2-201ENST00000306149 Q7L0L9 218 aa13.25□□□□□ -0.29
CSDC2-201ENST00000306149 SPAG16Q8N0X2 631 aa13.25□□□□□ -0.29
CSDC2-201ENST00000306149 GJC3Q8NFK1 279 aa13.25□□□□□ -0.29
CSDC2-201ENST00000306149 S100A13Q99584 98 aa13.25□□□□□ -0.29
CSDC2-201ENST00000306149 LPAR3Q9UBY5 353 aa13.25□□□□□ -0.29
CSDC2-201ENST00000306149 MCTS1Q9ULC4 181 aaKnown RBP13.25□□□□□ -0.29
CSDC2-201ENST00000306149 NPIPA2E9PIF3 369 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 NPIPA3F8WFD2 350 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 ANGPTL7O43827 346 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 F12P00748 615 aaPredicted RBP13.24□□□□□ -0.29
CSDC2-201ENST00000306149 SFTPBP07988 381 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 CD63P08962 238 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 MST1LQ2TV78 715 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 ZNF585AQ6P3V2 769 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 RAB11FIP2Q7L804 512 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 FAM89BQ8N5H3 189 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 RHBDD1Q8TEB9 315 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 SAP25Q8TEE9 199 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 NABP1Q96AH0 204 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 SEC11CQ9BY50 192 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 NELFAQ9H3P2 528 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 SAV1Q9H4B6 383 aaPredicted RBP13.24□□□□□ -0.29
CSDC2-201ENST00000306149 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.24□□□□□ -0.29
CSDC2-201ENST00000306149 GPR173Q9NS66 373 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 OSGIN2Q9Y236 505 aa13.24□□□□□ -0.29
CSDC2-201ENST00000306149 PTRH2Q9Y3E5 179 aaKnown RBP13.24□□□□□ -0.29
CSDC2-201ENST00000306149 PATE4P0C8F1 98 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms