RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 ACP1P24666 158 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 UBE2L6O14933 153 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 NEURL3Q96EH8 262 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 MEGF10Q96KG7 1140 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 DMRTC1Q5HYR2 192 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 SCMH1Q96GD3 660 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 PAAF1Q9BRP4 392 aa12.14□□□□□ -0.47
TRIM56-201ENST00000306085 GFRA2O00451 464 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 NTHL1P78549 312 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 SLAMF6Q96DU3 332 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 CD3DP04234 171 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 RPL27P61353 136 aaKnown RBP12.13□□□□□ -0.47
TRIM56-201ENST00000306085 FBXL6Q8N531 539 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 SLCO4A1Q96BD0 722 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 PITPNC1Q9UKF7 332 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 MMP17Q9ULZ9 603 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 PRSS8Q16651 343 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 C19orf54Q5BKX5 351 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 EGLN2Q96KS0 407 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 Q96M85 177 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 SARGQ9BW04 601 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 DEFB127Q9H1M4 99 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 C7orf72A4D263 438 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 GJB3O75712 270 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 POLR2IP36954 125 aaKnown RBP12.13□□□□□ -0.47
TRIM56-201ENST00000306085 PDPNQ86YL7 162 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 LILRA2Q8N149 483 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 RSG1Q9BU20 258 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 C1QTNF3Q9BXJ4 246 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 OR6S1Q8NH40 331 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 ABHD3Q8WU67 409 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 C11orf68Q9H3H3 251 aaKnown RBP12.13□□□□□ -0.47
TRIM56-201ENST00000306085 CD226Q15762 336 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 VMA21Q3ZAQ7 101 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 CALHM1Q8IU99 346 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 VRK3Q8IV63 474 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 D2HGDHQ8N465 521 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 OR10A7Q8NGE5 316 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 VN1R17PQ8TDU5 208 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 PCYT2Q99447 389 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 TIMM10BQ9Y5J6 103 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 TMEM265A0A087WTH1 108 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 PPP6CO00743 305 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 NRG2O14511 850 aaPredicted RBP12.13□□□□□ -0.47
TRIM56-201ENST00000306085 COX6CP09669 75 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 CXCL12P48061 93 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 ABHD14AQ9BUJ0 271 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 WSB1Q9Y6I7 421 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 MBTPS2O43462 519 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 SYT14P1Q58G82 188 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 TMEM56Q96MV1 263 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 NRSN2Q9GZP1 204 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 LAMB4A4D0S4 1761 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 CTSAP10619 480 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 CLN3Q13286 438 aa12.13□□□□□ -0.47
TRIM56-201ENST00000306085 OTUD1Q5VV17 481 aaPredicted RBP12.13□□□□□ -0.47
TRIM56-201ENST00000306085 IGHV3-15A0A0B4J1V0 119 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 IFITM10A6NMD0 228 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 PRRG2O14669 202 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 CTBSQ01459 385 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 HNRNPA1L2Q32P51 320 aaKnown RBP12.12□□□□□ -0.47
TRIM56-201ENST00000306085 ZNF683Q8IZ20 524 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 ARFGAP1Q8N6T3 406 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 LRRC15Q8TF66 581 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 ROBO4Q8WZ75 1007 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 CLDN23Q96B33 292 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 DEFB108AA8MXU0 73 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 CXorf67Q86X51 503 aaPredicted RBP12.12□□□□□ -0.47
TRIM56-201ENST00000306085 SGK494Q96LW2 274 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 OR6C3Q9NZP0 311 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 FBXO4Q9UKT5 387 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 HRO43593 1189 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 RBM45Q8IUH3 476 aaKnown RBP12.12□□□□□ -0.47
TRIM56-201ENST00000306085 MFRPQ9BY79 579 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 M0R082 166 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 SLC45A2Q9UMX9 530 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 A0A1B0GTW7 788 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 DUXBA0A1W2PPF3 345 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 ARNTLO00327 626 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 INHBCP55103 352 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 ZBTB37Q5TC79 503 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 MOB4Q9Y3A3 225 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 CTSLP07711 333 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 INSM1Q01101 510 aaPredicted RBP12.12□□□□□ -0.47
TRIM56-201ENST00000306085 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 MAP1LC3B2A6NCE7 125 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 THBS4P35443 961 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 HLA-BQ31612 363 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 HSF5Q4G112 596 aaPredicted RBP12.12□□□□□ -0.47
TRIM56-201ENST00000306085 SSX8Q7RTT4 187 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 GALNT16Q8N428 558 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 MAP1LC3BQ9GZQ8 125 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 HIST1H1CP16403 213 aaKnown RBP12.12□□□□□ -0.47
TRIM56-201ENST00000306085 SRP14P37108 136 aaKnown RBP12.12□□□□□ -0.47
TRIM56-201ENST00000306085 AUNIPQ9H7T9 357 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 Q9Y3F1 56 aa12.12□□□□□ -0.47
TRIM56-201ENST00000306085 SLC2A10O95528 541 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 FURINP09958 794 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 T-ENOLP0DO92 83 aa12.11□□□□□ -0.47
TRIM56-201ENST00000306085 SLC19A1P41440 591 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms