RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 PPP1R14DQ9NXH3 145 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 ARID1BQ8NFD5 2236 aaPredicted RBP11.5□□□□□ -0.57
COL3A1-201ENST00000304636 KLRC4-KLRK1H3BQV0 150 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 NRG2O14511 850 aaPredicted RBP11.5□□□□□ -0.57
COL3A1-201ENST00000304636 CDC14BO60729 498 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 GSK3AP49840 483 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 SLC37A1P57057 533 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 FUT7Q11130 342 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 SSX7Q7RTT5 188 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 CISD2Q8N5K1 135 aaKnown RBP11.5□□□□□ -0.57
COL3A1-201ENST00000304636 CTDSP1Q9GZU7 261 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 CNTD2Q9H8S5 307 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 ANKRD10Q9NXR5 420 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 TRAPPC1Q9Y5R8 145 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 C5orf49A4QMS7 147 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 CD160O95971 181 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 IGF2P01344 180 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 PTGFRP43088 359 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 PMP22Q01453 160 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 OR2B11Q5JQS5 317 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 TAAR6Q96RI8 345 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 VAMP8Q9BV40 100 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 TPPP3Q9BW30 176 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 RASL12Q9NYN1 266 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 A0A1W2PPH5 198 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 ONECUT2O95948 504 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 CTRB1P17538 263 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 CD200P41217 278 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 METAP1P53582 386 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 IFITM2Q01629 132 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 AWAT1Q58HT5 328 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 CTRB2Q6GPI1 263 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 ETFBKMTQ8IXQ9 262 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 SLC24A4Q8NFF2 622 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 NAA60Q9H7X0 242 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 DYNLRB1Q9NP97 96 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 SLC52A3Q9NQ40 469 aa11.5□□□□□ -0.57
COL3A1-201ENST00000304636 ZNF230Q9UIE0 474 aaPredicted RBP11.5□□□□□ -0.57
COL3A1-201ENST00000304636 H3BP45 60 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 MLF1P58340 268 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 PTP4A1Q93096 173 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 PARD6AQ9NPB6 346 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 FBXO34Q9NWN3 711 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 NKX6-3A6NJ46 265 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 IL3RAP26951 378 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 TMEM33P57088 247 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 KRTDAPP60985 99 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 ZNF345Q14585 488 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 SURF2Q15527 256 aaPredicted RBP11.49□□□□□ -0.57
COL3A1-201ENST00000304636 VAMP3Q15836 100 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 IGSF11Q5DX21 431 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 VHLLQ6RSH7 139 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 DRAM2Q6UX65 266 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 CHRDL1Q9BU40 450 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 SHARPINQ9H0F6 387 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 C12orf49Q9H741 205 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 GALR1P47211 349 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 UBE2G2P60604 165 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 OR8B8Q15620 311 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 TMEM241Q24JQ0 296 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 JMJD6Q6NYC1 403 aaPredicted RBP11.49□□□□□ -0.57
COL3A1-201ENST00000304636 OVCH2Q7RTZ1 564 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 UBE3DQ7Z6J8 389 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 SLC25A42Q86VD7 318 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 OR1N1Q8NGS0 311 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 EXTL1Q92935 676 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 ADGRG7Q96K78 797 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 MRGPRX3Q96LB0 322 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 RAB40CQ96S21 281 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 MS4A7Q9GZW8 240 aaPredicted RBP11.49□□□□□ -0.57
COL3A1-201ENST00000304636 DUSP13Q9UII6 198 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 UBE2L5PA0A1B0GUS4 154 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 CHEK1O14757 476 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 G0S2P27469 103 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 MPGP29372 298 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 ZFP36L2P47974 494 aaKnown RBP11.49□□□□□ -0.57
COL3A1-201ENST00000304636 OR5C1Q8NGR4 320 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 RPS4Y2Q8TD47 263 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 OIT3Q8WWZ8 545 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 CDK5RAP2Q96SN8 1893 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 FBXL14Q8N1E6 418 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 OR2C3Q8N628 320 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 MRGPRX1Q96LB2 322 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 OR2A5Q96R48 311 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 FRRS1LQ9P0K9 344 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 CLCF1Q9UBD9 225 aa11.49□□□□□ -0.57
COL3A1-201ENST00000304636 HIST1H3AP68431 136 aa11.48□□□□□ -0.57
COL3A1-201ENST00000304636 KMT5CQ86Y97 462 aa11.48□□□□□ -0.57
COL3A1-201ENST00000304636 GVQW1Q8N7I0 195 aa11.48□□□□□ -0.57
COL3A1-201ENST00000304636 TMEM37Q8WXS4 190 aa11.48□□□□□ -0.57
COL3A1-201ENST00000304636 XKRY2A2RUG3 117 aa11.48□□□□□ -0.57
COL3A1-201ENST00000304636 HYAL3O43820 417 aaPredicted RBP11.48□□□□□ -0.57
COL3A1-201ENST00000304636 DHRS3O75911 302 aa11.48□□□□□ -0.57
COL3A1-201ENST00000304636 ASCL1P50553 236 aa11.48□□□□□ -0.57
COL3A1-201ENST00000304636 HLA-DRB3P79483 266 aa11.48□□□□□ -0.57
COL3A1-201ENST00000304636 FMODQ06828 376 aa11.48□□□□□ -0.57
COL3A1-201ENST00000304636 TUSC1Q2TAM9 212 aa11.48□□□□□ -0.57
COL3A1-201ENST00000304636 RSRP1Q9BUV0 290 aa11.48□□□□□ -0.57
COL3A1-201ENST00000304636 GHITMQ9H3K2 345 aa11.48□□□□□ -0.57
COL3A1-201ENST00000304636 CTSVO60911 334 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms