RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 VAMP5O95183 116 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 NAT2P11245 290 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 TRA2AQ13595 282 aaKnown RBP eCLIP6.95□□□□□ -1.3
SCN9A-201ENST00000303354 SMIM21Q3B7S5 101 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 DHRS7BQ6IAN0 325 aaPredicted RBP6.95□□□□□ -1.3
SCN9A-201ENST00000303354 PRELID1Q9Y255 219 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 B3GALT5Q9Y2C3 310 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 CT45A10P0DMU9 189 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 CD1EP15812 388 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 TOR2AQ5JU69 321 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 H3F3CQ6NXT2 135 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 OR52N4Q8NGI2 321 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 TAAR6Q96RI8 345 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 PRDM14Q9GZV8 571 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 OR52N1Q8NH53 320 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 NANPQ8TBE9 248 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 PELI1Q96FA3 418 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 RTN4RQ9BZR6 473 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 SLC25A32Q9H2D1 315 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 HDGFL3Q9Y3E1 203 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 DDX60Q8IY21 1712 aaKnown RBP6.95□□□□□ -1.3
SCN9A-201ENST00000303354 CDIPTO14735 213 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 ADRA2CP18825 462 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 OR2B8PP59922 312 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 OR6K3Q8NGY3 331 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 OR10AC1Q8NH08 325 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 RASL10BQ96S79 203 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 NDFIP1Q9BT67 221 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 SAP30LQ9HAJ7 183 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 FABP5Q01469 135 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 ETV3LQ6ZN32 361 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 FAM43BQ6ZT52 329 aaPredicted RBP6.95□□□□□ -1.3
SCN9A-201ENST00000303354 RAB1CQ92928 201 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 CMC2Q9NRP2 79 aa6.95□□□□□ -1.3
SCN9A-201ENST00000303354 PIGBOS1A0A0B4J2F0 54 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 FHL5Q5TD97 284 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 STAC2Q6ZMT1 411 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 FAM109AQ8N4B1 249 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 TMEM102Q8N9M5 508 aaPredicted RBP6.94□□□□□ -1.3
SCN9A-201ENST00000303354 MVB12AQ96EY5 273 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 DDOQ99489 341 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 TCHHQ07283 1943 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 K7ESF4 209 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 DHRS4L2Q6PKH6 230 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 PRSS35Q8N3Z0 413 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 NXF2Q9GZY0 626 aaKnown RBP6.94□□□□□ -1.3
SCN9A-201ENST00000303354 KLK11Q9UBX7 282 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 IL5P05113 134 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 CALCRP30988 508 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 GZMKP49863 264 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 DLX5P56178 289 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 MS4A3Q96HJ5 214 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 ZMIZ1Q9ULJ6 1067 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 PSMB1P20618 241 aaKnown RBP6.94□□□□□ -1.3
SCN9A-201ENST00000303354 NCCRP1Q6ZVX7 275 aaPredicted RBP6.94□□□□□ -1.3
SCN9A-201ENST00000303354 LRRTM1Q86UE6 522 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 OR2L13Q8N349 312 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 EID2BQ96D98 161 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 TSPAN32Q96QS1 320 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 TMUB1Q9BVT8 246 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 SIAEQ9HAT2 523 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 UBBP0CG47 229 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 FNDC7Q5VTL7 733 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 C11orf44Q8N8P7 122 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 RXFP4Q8TDU9 374 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 C2CD4CQ8TF44 421 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 POM121L2Q96KW2 1035 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 MS4A10Q96PG2 267 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 FBXO8Q9NRD0 319 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 SLC35D1Q9NTN3 355 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 SYT5O00445 386 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 G0S2P27469 103 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 NUMA1Q14980 2115 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 ZNF486Q96H40 463 aaPredicted RBP6.94□□□□□ -1.3
SCN9A-201ENST00000303354 VSTM2LQ96N03 204 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 RABL2AQ9UBK7 228 aaPredicted RBP6.94□□□□□ -1.3
SCN9A-201ENST00000303354 RABL2BQ9UNT1 228 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 RAXQ9Y2V3 346 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 LAMB4A4D0S4 1761 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 EPHA2P29317 976 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 ARRB2P32121 409 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 FUT6P51993 359 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 RELL2Q8NC24 303 aaPredicted RBP6.94□□□□□ -1.3
SCN9A-201ENST00000303354 SLC25A40Q8TBP6 338 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 APOBEC3DQ96AK3 386 aaPredicted RBP6.94□□□□□ -1.3
SCN9A-201ENST00000303354 SEH1LQ96EE3 360 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 LINC00615Q96LM1 132 aaPredicted RBP6.94□□□□□ -1.3
SCN9A-201ENST00000303354 OR5V1Q9UGF6 321 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 TMEM30CPA0ZSE6 113 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 CLEC18AA5D8T8 446 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 SLC25A5P05141 298 aaKnown RBP6.94□□□□□ -1.3
SCN9A-201ENST00000303354 SP1P08047 785 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 RNPS1Q15287 305 aaKnown RBP6.94□□□□□ -1.3
SCN9A-201ENST00000303354 ISXQ2M1V0 245 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 CLEC18CQ8NCF0 446 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 ADGRG7Q96K78 797 aa6.94□□□□□ -1.3
SCN9A-201ENST00000303354 ZNF436Q9C0F3 470 aaPredicted RBP6.94□□□□□ -1.3
SCN9A-201ENST00000303354 STRAPQ9Y3F4 350 aaKnown RBP6.94□□□□□ -1.3
SCN9A-201ENST00000303354 DDX60LQ5H9U9 1706 aaKnown RBP6.93□□□□□ -1.3
SCN9A-201ENST00000303354 RD3LP0DJH9 198 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms