RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 ZIC4Q8N9L1 334 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 SLC30A7Q8NEW0 376 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 GJC3Q8NFK1 279 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 SLC39A7Q92504 469 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 CLDN23Q96B33 292 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 SHDQ96IW2 340 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 NKX6-2Q9C056 277 aaPredicted RBP11.92□□□□□ -0.5
BCCIP-202ENST00000299130 METTL8Q9H825 291 aaKnown RBP11.92□□□□□ -0.5
BCCIP-202ENST00000299130 TNFSF11O14788 317 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 DHHO43323 396 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 FAM157CP0CG43 387 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 CD79AP11912 226 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 TPT1P13693 172 aaKnown RBP11.92□□□□□ -0.5
BCCIP-202ENST00000299130 LIFP15018 202 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 GABRR1P24046 479 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 THBS4P35443 961 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 GUCA2BQ16661 112 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 NKAPLQ5M9Q1 402 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 ZNF468Q5VIY5 522 aaPredicted RBP11.92□□□□□ -0.5
BCCIP-202ENST00000299130 LYSMD4Q5XG99 296 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 FAM122CQ6P4D5 195 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 Q7L0L9 218 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 GALNTL5Q7Z4T8 443 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 POC1AQ8NBT0 407 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 OR9K2Q8NGE7 335 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 OR2AE1Q8NHA4 323 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 IMMP1LQ96LU5 166 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 PIGQQ9BRB3 760 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 SRXN1Q9BYN0 137 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 ZC4H2Q9NQZ6 224 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 GPR173Q9NS66 373 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 TMEM100Q9NV29 134 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 ZNF701Q9NV72 531 aaPredicted RBP11.92□□□□□ -0.5
BCCIP-202ENST00000299130 GSKIPQ9P0R6 139 aa11.92□□□□□ -0.5
BCCIP-202ENST00000299130 SDK2Q58EX2 2172 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 LOC102723996A0A087X1L8 192 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 A0A0J9YW62 118 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 A0A0U1RQV5 110 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 TMEM218A2RU14 115 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 DHRS7CA6NNS2 312 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 NPIPA2E9PIF3 369 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 NPIPA3F8WFD2 350 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 COX6A1P12074 109 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 ACKR3P25106 362 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 NTF4P34130 210 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 PTGER4P35408 488 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 ALDH3B1P43353 468 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 CBX5P45973 191 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 HIST1H3AP68431 136 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 CYCSP99999 105 aaKnown RBP11.91□□□□□ -0.5
BCCIP-202ENST00000299130 HGFACQ04756 655 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 HIST2H3PS2Q5TEC6 136 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 PRSS54Q6PEW0 395 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 FOXL2NBQ6ZUU3 175 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 HIST2H3AQ71DI3 136 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 FOXRED2Q8IWF2 684 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 SGK3Q96BR1 496 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 CHST5Q9GZS9 411 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 TMEM231Q9H6L2 316 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 ACKR4Q9NPB9 350 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.91□□□□□ -0.5
BCCIP-202ENST00000299130 PTRH2Q9Y3E5 179 aaKnown RBP11.91□□□□□ -0.5
BCCIP-202ENST00000299130 VPS13AQ96RL7 3174 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 M0R135 149 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 ANGPTL7O43827 346 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 ATG12O94817 140 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 ZNF205O95201 554 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 LYL1P12980 280 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 CCL4P13236 92 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 OTX1P32242 354 aaPredicted RBP11.91□□□□□ -0.5
BCCIP-202ENST00000299130 GUCA1AP43080 201 aaPredicted RBP11.91□□□□□ -0.5
BCCIP-202ENST00000299130 AIMP2Q13155 320 aaKnown RBP11.91□□□□□ -0.5
BCCIP-202ENST00000299130 IL15RAQ13261 267 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 MST1LQ2TV78 715 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 ZNF585AQ6P3V2 769 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 SLC16A14Q7RTX9 510 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 OR4A4PQ8NGN8 299 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 HAS2Q92819 552 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 ZNF799Q96GE5 643 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 ANGPTL4Q9BY76 406 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 OR2S2Q9NQN1 319 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 PLEK2Q9NYT0 353 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 FOXD3Q9UJU5 478 aaPredicted RBP11.91□□□□□ -0.5
BCCIP-202ENST00000299130 LHX6Q9UPM6 363 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 PCDHGA1Q9Y5H4 931 aa11.91□□□□□ -0.5
BCCIP-202ENST00000299130 KLF7O75840 302 aaPredicted RBP11.9□□□□□ -0.5
BCCIP-202ENST00000299130 F12P00748 615 aaPredicted RBP11.9□□□□□ -0.5
BCCIP-202ENST00000299130 S100A10P60903 97 aa11.9□□□□□ -0.5
BCCIP-202ENST00000299130 ZNF169Q14929 603 aaPredicted RBP11.9□□□□□ -0.5
BCCIP-202ENST00000299130 CHRFAM7AQ494W8 412 aa11.9□□□□□ -0.5
BCCIP-202ENST00000299130 PDSS1Q5T2R2 415 aa11.9□□□□□ -0.5
BCCIP-202ENST00000299130 PUSL1Q8N0Z8 303 aaKnown RBP11.9□□□□□ -0.5
BCCIP-202ENST00000299130 IFI44Q8TCB0 444 aa11.9□□□□□ -0.5
BCCIP-202ENST00000299130 MR1Q95460 341 aa11.9□□□□□ -0.5
BCCIP-202ENST00000299130 C2orf50Q96LR7 162 aa11.9□□□□□ -0.5
BCCIP-202ENST00000299130 TM2D1Q9BX74 207 aa11.9□□□□□ -0.5
BCCIP-202ENST00000299130 SLC6A15Q9H2J7 730 aa11.9□□□□□ -0.5
BCCIP-202ENST00000299130 LIME1Q9H400 295 aa11.9□□□□□ -0.5
BCCIP-202ENST00000299130 SLC39A1Q9NY26 324 aa11.9□□□□□ -0.5
BCCIP-202ENST00000299130 HS3ST3B1Q9Y662 390 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms