RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 GGNBP1Q5YKI7 109 aa13.21□□□□□ -0.3
SPIDR-201ENST00000297423 FBXW12Q6X9E4 464 aa13.21□□□□□ -0.3
SPIDR-201ENST00000297423 Q7L0L9 218 aa13.21□□□□□ -0.3
SPIDR-201ENST00000297423 ZNF283Q8N7M2 679 aa13.21□□□□□ -0.3
SPIDR-201ENST00000297423 PRRX2Q99811 253 aa13.21□□□□□ -0.3
SPIDR-201ENST00000297423 MENTQ9BUN1 341 aa13.21□□□□□ -0.3
SPIDR-201ENST00000297423 VDAC3Q9Y277 283 aa13.21□□□□□ -0.3
SPIDR-201ENST00000297423 KCNIP3Q9Y2W7 256 aa13.21□□□□□ -0.3
SPIDR-201ENST00000297423 FANCMQ8IYD8 2048 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 ATG2AQ2TAZ0 1938 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 CTSBP07858 339 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 HOXC4P09017 264 aaPredicted RBP13.2□□□□□ -0.3
SPIDR-201ENST00000297423 NKAIN1Q4KMZ8 207 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 MAMDC2Q7Z304 686 aaPredicted RBP13.2□□□□□ -0.3
SPIDR-201ENST00000297423 OR5D14Q8NGL3 314 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 MCHR2Q969V1 340 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 ZNF764Q96H86 408 aaPredicted RBP13.2□□□□□ -0.3
SPIDR-201ENST00000297423 CDX2Q99626 313 aaPredicted RBP13.2□□□□□ -0.3
SPIDR-201ENST00000297423 C5orf66Q9H5L9 145 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 ZNF264O43296 627 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 PNMTP11086 282 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 VAMP2P63027 116 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 PLAURQ03405 335 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 BRICD5Q6PL45 260 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 ZNF2Q9BSG1 426 aaPredicted RBP13.2□□□□□ -0.3
SPIDR-201ENST00000297423 MFRPQ9BY79 579 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 LRFN1Q9P244 771 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 LIPGQ9Y5X9 500 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 TMEM225BP0DP42 221 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 VSIG8P0DPA2 414 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 POU3F1Q03052 451 aaPredicted RBP13.2□□□□□ -0.3
SPIDR-201ENST00000297423 BEND4Q6ZU67 534 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 SLC22A24Q8N4F4 322 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 MRPL24Q96A35 216 aaKnown RBP13.2□□□□□ -0.3
SPIDR-201ENST00000297423 MISP3Q96FF7 219 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 WFIKKN1Q96NZ8 548 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 URM1Q9BTM9 101 aaKnown RBP13.2□□□□□ -0.3
SPIDR-201ENST00000297423 NMES1Q9C002 83 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 OR10A5Q9H207 317 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 DNAJB11Q9UBS4 358 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 PISDQ9UG56 409 aa13.2□□□□□ -0.3
SPIDR-201ENST00000297423 AGAP20933 346 aa13.19□□□□□ -0.3
SPIDR-201ENST00000297423 SULT1A2P50226 295 aa13.19□□□□□ -0.3
SPIDR-201ENST00000297423 CCR5P51681 352 aa13.19□□□□□ -0.3
SPIDR-201ENST00000297423 OR8G1Q15617 311 aa13.19□□□□□ -0.3
SPIDR-201ENST00000297423 NUP54Q7Z3B4 507 aa13.19□□□□□ -0.3
SPIDR-201ENST00000297423 B3GALT5Q9Y2C3 310 aa13.19□□□□□ -0.3
SPIDR-201ENST00000297423 SLC37A1P57057 533 aa13.19□□□□□ -0.3
SPIDR-201ENST00000297423 MLF1P58340 268 aa13.19□□□□□ -0.3
SPIDR-201ENST00000297423 NAAAQ02083 359 aa13.19□□□□□ -0.3
SPIDR-201ENST00000297423 NHLH2Q02577 135 aa13.19□□□□□ -0.3
SPIDR-201ENST00000297423 GNMTQ14749 295 aa13.19□□□□□ -0.3
SPIDR-201ENST00000297423 MRPL41Q8IXM3 137 aaKnown RBP13.19□□□□□ -0.3
SPIDR-201ENST00000297423 KLHDC3Q9BQ90 382 aa13.19□□□□□ -0.3
SPIDR-201ENST00000297423 NIPSNAP3BQ9BS92 247 aa13.19□□□□□ -0.3
SPIDR-201ENST00000297423 C1orf123Q9NWV4 160 aa13.19□□□□□ -0.3
SPIDR-201ENST00000297423 NPIPB9F8W1W9 429 aa13.19□□□□□ -0.3
SPIDR-201ENST00000297423 NKX2-2O95096 273 aa13.19□□□□□ -0.3
SPIDR-201ENST00000297423 ABHD16AO95870 558 aa13.19□□□□□ -0.3
SPIDR-201ENST00000297423 HEXAP06865 529 aa13.19□□□□□ -0.3
SPIDR-201ENST00000297423 SSBP1Q04837 148 aaKnown RBP13.19□□□□□ -0.3
SPIDR-201ENST00000297423 PACRGQ96M98 296 aaPredicted RBP13.19□□□□□ -0.3
SPIDR-201ENST00000297423 OR2A5Q96R48 311 aa13.19□□□□□ -0.3
SPIDR-201ENST00000297423 SLC5A7Q9GZV3 580 aa13.19□□□□□ -0.3
SPIDR-201ENST00000297423 LRRK1Q38SD2 2015 aa13.19□□□□□ -0.3
SPIDR-201ENST00000297423 ZNF705FA8MVS1 300 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-201ENST00000297423 C17orf105B2RV13 164 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 B4DGG1 531 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 CST7O76096 145 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 CNOT4O95628 575 aaKnown RBP13.18□□□□□ -0.3
SPIDR-201ENST00000297423 ZNF705DP0CH99 300 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-201ENST00000297423 ZNF705BP0CI00 300 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-201ENST00000297423 BCKDHBP21953 392 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 CDX1P47902 265 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-201ENST00000297423 CSNK1EP49674 416 aaKnown RBP13.18□□□□□ -0.3
SPIDR-201ENST00000297423 SHISA6Q6ZSJ9 500 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 KIR3DX1Q9H7L2 352 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 PLEKHJ1Q9NW61 149 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 DIDO1Q9BTC0 2240 aaKnown RBP13.18□□□□□ -0.3
SPIDR-201ENST00000297423 PRSS37A4D1T9 235 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 SCGB1D1O95968 90 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 MBP02144 154 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 MMP9P14780 707 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 OR3A4PP47883 348 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 RPL23AP62750 156 aaKnown RBP13.18□□□□□ -0.3
SPIDR-201ENST00000297423 SLC35A1P78382 337 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 ZNF260Q3ZCT1 412 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 RNF144BQ7Z419 303 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 FAM131CQ96AQ9 280 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 H0YIG0 161 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 H3BQ15 152 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 SLC31A2O15432 143 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 HKR1P10072 659 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 ERGP11308 486 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 FHL1Q13642 323 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 PDCD1Q15116 288 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 KHDC3LQ587J8 217 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 OPN5Q6U736 354 aa13.18□□□□□ -0.3
SPIDR-201ENST00000297423 ZNF705AQ6ZN79 300 aaPredicted RBP13.18□□□□□ -0.3
SPIDR-201ENST00000297423 ZNF429Q86V71 674 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms