RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 PLSCR3Q9NRY6 295 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 GPR173Q9NS66 373 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 TBPP20226 339 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 RPS27AP62979 156 aaKnown RBP7.94□□□□□ -1.14
PDPN-201ENST00000294489 ARL6IP1Q15041 203 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 PNLIPRP3Q17RR3 467 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 COLCA1Q6ZS62 124 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 SPACA3Q8IXA5 215 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 MED12LQ86YW9 2145 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 FRYQ5TBA9 3013 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 A0A0A6YYD4 124 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 A0A1W2PP11 408 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 SOCS1O15524 211 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 CNOT4O95628 575 aaKnown RBP7.94□□□□□ -1.14
PDPN-201ENST00000294489 MGMTP16455 207 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 SERPINA2P20848 420 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 ARR3P36575 388 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 ZMYND11Q15326 602 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 NDUFA5Q16718 116 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 SCGB2B2Q4G0G5 96 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 SPICQ8N5J4 248 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 CPEB3Q8NE35 698 aaKnown RBP7.94□□□□□ -1.14
PDPN-201ENST00000294489 OR4S1Q8NGB4 309 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 WNT2BQ93097 391 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 SARAFQ96BY9 339 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 BORCS8Q96FH0 119 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 C1QTNF5Q9BXJ0 243 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 GON7Q9BXV9 100 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 ALX4Q9H161 411 aaPredicted RBP7.94□□□□□ -1.14
PDPN-201ENST00000294489 MGAT4CQ9UBM8 478 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 HSPB11Q9Y547 144 aa7.94□□□□□ -1.14
PDPN-201ENST00000294489 TMEM82A0PJX8 343 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 AHRRA9YTQ3 701 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 K7ENP7 123 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 NRASP01111 189 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 IFNA6P05013 189 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 CSN2P05814 226 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 TMEM225BP0DP42 221 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 CD79AP11912 226 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 SPINK2P20155 84 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 CPT2P23786 658 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 RBP2P50120 134 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 FAM3AP98173 230 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 ZNF92Q03936 586 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 PLP2Q04941 152 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 FBXW9Q5XUX1 488 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 ALKBH2Q6NS38 261 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 INO80CQ6PI98 192 aaPredicted RBP7.93□□□□□ -1.14
PDPN-201ENST00000294489 CRIP3Q6Q6R5 217 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 LHFPL2Q6ZUX7 228 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 SLC36A1Q7Z2H8 476 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 C1QL2Q7Z5L3 287 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 FAM89BQ8N5H3 189 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 GVQW1Q8N7I0 195 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 ZNF431Q8TF32 576 aaPredicted RBP7.93□□□□□ -1.14
PDPN-201ENST00000294489 SPSB4Q96A44 273 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 DLL4Q9NR61 685 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 SLC2A8Q9NY64 477 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 B3GNT2Q9NY97 397 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 MGAT4AQ9UM21 535 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 LHX6Q9UPM6 363 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 SLC7A11Q9UPY5 501 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 KCNK7Q9Y2U2 307 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 NPTNQ9Y639 398 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 FAM186AA6NE01 2351 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 hCG_38984A0A1B0GV85 526 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 FAM230AA0A1W2PPH8 454 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 IL18BPO95998 194 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 HLA-HP01893 362 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 CSTBP04080 98 aaKnown RBP7.93□□□□□ -1.14
PDPN-201ENST00000294489 VSIG10L2P0DP72 767 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 CCNOP22674 350 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 DNASE1P24855 282 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 MPGP29372 298 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 CBX5P45973 191 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 FOXG1P55316 489 aaPredicted RBP7.93□□□□□ -1.14
PDPN-201ENST00000294489 TMEM50BP56557 158 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 ZP1P60852 638 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 CXADRP78310 365 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 ARFRP1Q13795 201 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 NKPD1Q17RQ9 610 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 PLAC9Q5JTB6 97 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 ZNF324BQ6AW86 544 aaPredicted RBP7.93□□□□□ -1.14
PDPN-201ENST00000294489 TMEM53Q6P2H8 277 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 P4HA3Q7Z4N8 544 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 CD163Q86VB7 1156 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 OR2T35Q8NGX2 323 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 BCL2L2Q92843 193 aaPredicted RBP7.93□□□□□ -1.14
PDPN-201ENST00000294489 ARHGAP5-AS1Q96IT6 56 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 TECTBQ96PL2 329 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 METTL9Q9H1A3 318 aa7.93□□□□□ -1.14
PDPN-201ENST00000294489 ZNF816-ZNF321PA0A0X1KG74 233 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 K7EM74 188 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 B3GALNT1O75752 331 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 ZNF735P0CB33 412 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 BLVRBP30043 206 aaPredicted RBP7.92□□□□□ -1.14
PDPN-201ENST00000294489 OR8B8Q15620 311 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 TMEM42Q69YG0 159 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 RTL6Q6ICC9 239 aa7.92□□□□□ -1.14
PDPN-201ENST00000294489 TFAP2EQ6VUC0 442 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms