RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 ICAM5Q9UMF0 924 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 RCL1Q9Y2P8 373 aaKnown RBP11.43□□□□□ -0.58
PTCD1-201ENST00000292478 IGHA1P01876 353 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 TNFRSF1AP19438 455 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 KCNJ3P48549 501 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 GPM6AP51674 278 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 UBE2IP63279 158 aaKnown RBP11.43□□□□□ -0.58
PTCD1-201ENST00000292478 THSD4Q6ZMP0 1018 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 WFDC8Q8IUA0 241 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 FBXL14Q8N1E6 418 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 ZNF439Q8NDP4 499 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 OR52N4Q8NGI2 321 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 C10orf35Q96D05 121 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 TINAGL1Q9GZM7 467 aaPredicted RBP11.43□□□□□ -0.58
PTCD1-201ENST00000292478 FBXO34Q9NWN3 711 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 MTCH1Q9NZJ7 389 aa11.43□□□□□ -0.58
PTCD1-201ENST00000292478 MICAL3Q7RTP6 2002 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 QSER1Q2KHR3 1735 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 SULT1A3P0DMM9 295 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 SULT1A4P0DMN0 295 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 AGFG1P52594 562 aaKnown RBP11.42□□□□□ -0.58
PTCD1-201ENST00000292478 UBE3DQ7Z6J8 389 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 FAM58AQ8N1B3 248 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 MAP6Q96JE9 813 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 CXorf58Q96LI9 332 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 CHRDL1Q9BU40 450 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 SF3B5Q9BWJ5 86 aaKnown RBP11.42□□□□□ -0.58
PTCD1-201ENST00000292478 TRGV10A0A0A0MS01 117 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 ZNF727A8MUV8 499 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 AKR7A2O43488 359 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 TRAF3IP2O43734 574 aaPredicted RBP11.42□□□□□ -0.58
PTCD1-201ENST00000292478 SFT2D2O95562 160 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 ATG4DQ86TL0 474 aaPredicted RBP11.42□□□□□ -0.58
PTCD1-201ENST00000292478 OR11G2Q8NGC1 345 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 CLDN23Q96B33 292 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 CDC42EP2O14613 210 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 MPLP40238 635 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 FMODQ06828 376 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 Q7L0L9 218 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 D2HGDHQ8N465 521 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 ZFP62Q8NB50 900 aaPredicted RBP11.42□□□□□ -0.58
PTCD1-201ENST00000292478 ASB10Q8WXI3 467 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 NEURL2Q9BR09 285 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 MARVELD1Q9BSK0 173 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 FBXO4Q9UKT5 387 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 DCTN6O00399 190 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 RRASP10301 218 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 HOXB3P14651 431 aaPredicted RBP11.42□□□□□ -0.58
PTCD1-201ENST00000292478 FABP6P51161 128 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 FZD5Q13467 585 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 OTPQ5XKR4 325 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 DUSP18Q8NEJ0 188 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 BSCL2Q96G97 398 aaPredicted RBP11.42□□□□□ -0.58
PTCD1-201ENST00000292478 ADAMTSL1Q8N6G6 1762 aa11.42□□□□□ -0.58
PTCD1-201ENST00000292478 RAB27BO00194 218 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 WNT1P04628 370 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 GLI4P10075 376 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 TIGITQ495A1 244 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 FAM162BQ5T6X4 162 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 NPEPL1Q8NDH3 523 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 RNF24Q9Y225 148 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 A0A1W2PPV9 198 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 AANATQ16613 207 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 HAGHQ16775 308 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 FAHD2BQ6P2I3 314 aaPredicted RBP11.41□□□□□ -0.58
PTCD1-201ENST00000292478 LCN15Q6UWW0 184 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 DBX2Q6ZNG2 339 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 TRILQ7L0X0 811 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 OR4F5Q8NH21 305 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 SLC39A7Q92504 469 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 FAHD2AQ96GK7 314 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 OR4F4Q96R69 305 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 ADAT1Q9BUB4 502 aaKnown RBP11.41□□□□□ -0.58
PTCD1-201ENST00000292478 FAM60AQ9NP50 221 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 SHISA8B8ZZ34 492 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 HPP00738 406 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 CST4P01036 141 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 RFC3P40938 356 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 MEOX1P50221 254 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 RPS16P62249 146 aaKnown RBP11.41□□□□□ -0.58
PTCD1-201ENST00000292478 SSX9Q7RTT3 188 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 ERGIC1Q969X5 290 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 PRRX2Q99811 253 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 PARP12Q9H0J9 701 aaKnown RBP11.41□□□□□ -0.58
PTCD1-201ENST00000292478 ZNF831Q5JPB2 1677 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 ANKRD20A5PA0PJZ0 165 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 IAPPP10997 89 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 SSTP61278 116 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 LSM6P62312 80 aaKnown RBP11.41□□□□□ -0.58
PTCD1-201ENST00000292478 ADAM5Q6NVV9 412 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 GLRX2Q9NS18 164 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 RGPD4Q7Z3J3 1758 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 CLEC18AA5D8T8 446 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 ATP6V1G2-DDX39BF2Z307 99 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 RER1O15258 196 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 CT45A10P0DMU9 189 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 KIR2DL1P43626 348 aaPredicted RBP11.41□□□□□ -0.58
PTCD1-201ENST00000292478 CLEC18CQ8NCF0 446 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 DEFB108BQ8NET1 73 aa11.41□□□□□ -0.58
PTCD1-201ENST00000292478 GNRHR2Q96P88 292 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms