RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 RNLSQ5VYX0 342 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 BSCL2Q96G97 398 aaPredicted RBP10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 SEC11CQ9BY50 192 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 SLC35B3Q9H1N7 401 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 LOC107986453A0A1B0GWG9 222 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 RBP2P50120 134 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 SUMO3P55854 103 aaPredicted RBP10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 KRTDAPP60985 99 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 RANP62826 216 aaKnown RBP10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 IRF3Q14653 427 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 YRDCQ86U90 279 aaKnown RBP10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 TMEM229BQ8NBD8 167 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 EMG1Q92979 244 aaKnown RBP10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 LHX4Q969G2 390 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 ANKRD9Q96BM1 317 aaPredicted RBP10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 SLC35A4Q96G79 324 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 ZNF2Q9BSG1 426 aaPredicted RBP10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 VAMP8Q9BV40 100 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 PPP1R3EQ9H7J1 279 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 CALHM2Q9HA72 323 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 SLC22A13Q9Y226 551 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 LRP5LA4QPB2 252 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 G3V3Q6 166 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 PLPP2O43688 288 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 VAMP5O95183 116 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 METTL15P1P0C7V9 234 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 FGF5P12034 268 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 KITLGP21583 273 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 MSMO1Q15800 293 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 NCR3LG1Q68D85 454 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 ST8SIA1Q92185 356 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 FAM210BQ96KR6 192 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 CMTM3Q96MX0 182 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 TRIB1Q96RU8 372 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 SDF2Q99470 211 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 PRDM7Q9NQW5 492 aa10.19□□□□□ -0.78
NPC1L1-201ENST00000289547 EML2O95834 649 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 SSBP1Q04837 148 aaKnown RBP10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 GUCA2BQ16661 112 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 MRM1Q6IN84 353 aaKnown RBP10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 LRFN5Q96NI6 719 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 LAT2Q9GZY6 243 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 FAM60AQ9NP50 221 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 WSB1Q9Y6I7 421 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 PPP1R1AQ13522 171 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 TMEM128Q5BJH2 165 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 PUSL1Q8N0Z8 303 aaKnown RBP10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 C17orf47Q8NEP4 570 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 APH1AQ96BI3 265 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 SPACA5Q96QH8 159 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 GHITMQ9H3K2 345 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 GPR173Q9NS66 373 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 PLSCR5A0PG75 271 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 ZNF320A2RRD8 509 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 CLDN34H7C241 214 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 PTP4A3O75365 173 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 SLC2A1P11166 492 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 DCXRQ7Z4W1 244 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 HSD17B8Q92506 261 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 HGDQ93099 445 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 SCARF2Q96GP6 870 aaPredicted RBP10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 ZNF845Q96IR2 970 aaPredicted RBP10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 COL25A1Q9BXS0 654 aaPredicted RBP10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 OR51M1Q9H341 326 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 FLVCR1Q9Y5Y0 555 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 PTBP3O95758 552 aaKnown RBP10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 ADRA2CP18825 462 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 HNF1AP20823 631 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 ZNF787Q6DD87 383 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 PLA2G3Q9NZ20 509 aa10.18□□□□□ -0.78
NPC1L1-201ENST00000289547 TRGV5A0A0B4J1U4 118 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 MED19A0JLT2 244 aaPredicted RBP10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 ANKRD20A5PA0PJZ0 165 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 CXCL2P19875 107 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 MEOX1P50221 254 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 ZNF90Q03938 601 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 MYBPHQ13203 477 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 INPP5JQ15735 1006 aaPredicted RBP10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 OR8G2PQ6IF36 304 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 OR51A2Q8NGJ7 313 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 PIGCQ92535 297 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 NUDT9Q9BW91 350 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 OR5V1Q9UGF6 321 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 IL17BQ9UHF5 180 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 MED16Q9Y2X0 877 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 OR5H15A6NDH6 313 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 PCP4P48539 62 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 GSK3AP49840 483 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 DSCR4P56555 118 aaPredicted RBP10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 CLDN17P56750 224 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 PMS2P11Q13670 270 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 GTF2H5Q6ZYL4 71 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 THNSL2Q86YJ6 484 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 MKXQ8IYA7 352 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 OR4F5Q8NH21 305 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 ZNF596Q8TC21 504 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 PELI1Q96FA3 418 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 OR4F4Q96R69 305 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 ABHD6Q9BV23 337 aa10.17□□□□□ -0.78
NPC1L1-201ENST00000289547 NECAP2Q9NVZ3 263 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms