RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 C12orf49Q9H741 205 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 LYRM4Q9HD34 91 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 DAPP1Q9UN19 280 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 H3BNC9 293 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 SDHBP21912 280 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 FKBP2P26885 142 aaKnown RBP8.2□□□□□ -1.1
SMC2-201ENST00000286398 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.2□□□□□ -1.14e-8■■■■□ 26.4
SMC2-201ENST00000286398 AGBL5Q8NDL9 886 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 DEFB108BQ8NET1 73 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 CHAC2Q8WUX2 184 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 RLN3Q8WXF3 142 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 MS4A6EQ96DS6 147 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 NEIL1Q96FI4 390 aaPredicted RBP8.2□□□□□ -1.1
SMC2-201ENST00000286398 TBX15Q96SF7 602 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 NPAS1Q99742 590 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 DUSP23Q9BVJ7 150 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 KIAA1456Q9P272 454 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 UNC13AQ9UPW8 1703 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 COL1A1P02452 1464 aaPredicted RBP8.2□□□□□ -1.1
SMC2-201ENST00000286398 RBFOX3A6NFN3 312 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 TMEM189-UBE2V1I3L0A0 370 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 HPP00738 406 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 GABRA1P14867 456 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 CD81P60033 236 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 YPEL5P62699 121 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 SMAD4Q13485 552 aaKnown RBP8.2□□□□□ -1.1
SMC2-201ENST00000286398 OSR2Q8N2R0 312 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 OR10A7Q8NGE5 316 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 FAHD2AQ96GK7 314 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 RBM14Q96PK6 669 aaKnown RBP8.2□□□□□ -1.1
SMC2-201ENST00000286398 P2RY12Q9H244 342 aa8.2□□□□□ -1.1
SMC2-201ENST00000286398 TMPRSS11DO60235 418 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 IGHA1P01876 353 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 FABP2P12104 132 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 G6PCP35575 357 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 DMRTC1Q5HYR2 192 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 MRPS24Q96EL2 167 aaKnown RBP8.19□□□□□ -1.1
SMC2-201ENST00000286398 SPAG8Q99932 426 aaPredicted RBP8.19□□□□□ -1.1
SMC2-201ENST00000286398 PECRQ9BY49 303 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 MS4A7Q9GZW8 240 aaPredicted RBP8.19□□□□□ -1.1
SMC2-201ENST00000286398 RBM38Q9H0Z9 239 aaKnown RBP8.19□□□□□ -1.1
SMC2-201ENST00000286398 PEAK1Q9H792 1746 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 GPANK1O95872 356 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 GLRA1P23415 457 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 SLC38A11Q08AI6 406 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 TMEM267Q0VDI3 215 aaPredicted RBP8.19□□□□□ -1.1
SMC2-201ENST00000286398 ZNF385CQ66K41 422 aaPredicted RBP8.19□□□□□ -1.1
SMC2-201ENST00000286398 FDX2Q6P4F2 183 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 OR2C3Q8N628 320 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 RAB40CQ96S21 281 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 EGLN1Q9GZT9 426 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 MED29Q9NX70 200 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 OR5B21A6NL26 309 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 SFT2D2O95562 160 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 GP1BAP07359 652 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 CD40P25942 277 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 HLA-BQ31612 363 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 RAB24Q969Q5 203 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 S1PR5Q9H228 398 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 SLC25A22Q9H936 323 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 TNFRSF12AQ9NP84 129 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 TMEM140Q9NV12 185 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 GDE1Q9NZC3 331 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 TMEFF2Q9UIK5 374 aaPredicted RBP8.19□□□□□ -1.1
SMC2-201ENST00000286398 C9orf170A2RU37 121 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 TSPAN13O95857 204 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 WNT11O96014 354 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 CA2P00918 260 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 HRASP01112 189 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 SELEP16581 610 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 CD22P20273 847 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 OR3A1P47881 315 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 CLN3Q13286 438 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 ELAVL1Q15717 326 aaKnown RBP8.19□□□□□ -1.1
SMC2-201ENST00000286398 RNF2Q99496 336 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 TXNIPQ9H3M7 391 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 TCRBV5S1A1TA0A578 114 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 MBLAC1A4D2B0 266 aaPredicted RBP8.19□□□□□ -1.1
SMC2-201ENST00000286398 CRYBB2P43320 205 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 HAAOP46952 286 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 MVDP53602 400 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 ADAMTSL4Q6UY14 1074 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 FOXJ3Q9UPW0 622 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 ASB1Q9Y576 335 aa8.19□□□□□ -1.1
SMC2-201ENST00000286398 CACNA1FO60840 1977 aa8.18□□□□□ -1.1
SMC2-201ENST00000286398 H7C2G1 150 aa8.18□□□□□ -1.1
SMC2-201ENST00000286398 PRRX1P54821 245 aa8.18□□□□□ -1.1
SMC2-201ENST00000286398 RBPJQ06330 500 aa8.18□□□□□ -1.1
SMC2-201ENST00000286398 NUFIP2Q7Z417 695 aaKnown RBP8.18□□□□□ -1.1
SMC2-201ENST00000286398 EIF4E3Q8N5X7 224 aaKnown RBP8.18□□□□□ -1.1
SMC2-201ENST00000286398 KLHDC9Q8NEP7 349 aa8.18□□□□□ -1.1
SMC2-201ENST00000286398 NUP37Q8NFH4 326 aa8.18□□□□□ -1.1
SMC2-201ENST00000286398 ROBO4Q8WZ75 1007 aa8.18□□□□□ -1.1
SMC2-201ENST00000286398 SPACA9Q96E40 222 aaPredicted RBP8.18□□□□□ -1.1
SMC2-201ENST00000286398 POM121L2Q96KW2 1035 aa8.18□□□□□ -1.1
SMC2-201ENST00000286398 DOK1Q99704 481 aa8.18□□□□□ -1.1
SMC2-201ENST00000286398 C1QTNF6Q9BXI9 259 aa8.18□□□□□ -1.1
SMC2-201ENST00000286398 NAT8Q9UHE5 227 aa8.18□□□□□ -1.1
SMC2-201ENST00000286398 SLC45A2Q9UMX9 530 aa8.18□□□□□ -1.1
SMC2-201ENST00000286398 FUT9Q9Y231 359 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms