RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 CHST5Q9GZS9 411 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 KLK11Q9UBX7 282 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 XRCC2O43543 280 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 ADORA2A-AS1P86434 159 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 SLC25A26Q70HW3 274 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 LRRC28Q86X40 367 aaPredicted RBP11.43□□□□□ -0.58
ACER3-201ENST00000278544 C17orf78Q8N4C9 275 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 BOLLQ8N9W6 283 aaKnown RBP11.43□□□□□ -0.58
ACER3-201ENST00000278544 ST6GALNAC3Q8NDV1 305 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 C19orf18Q8NEA5 215 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 OR8S1Q8NH09 359 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 SEH1LQ96EE3 360 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 SORCS2Q96PQ0 1159 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 HS3ST6Q96QI5 342 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 REPIN1Q9BWE0 567 aaKnown RBP11.43□□□□□ -0.58
ACER3-201ENST00000278544 IL36RNQ9UBH0 155 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 FASNP49327 2511 aaKnown RBP11.43□□□□□ -0.58
ACER3-201ENST00000278544 ZNF732B4DXR9 585 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 TIMM8AO60220 97 aaPredicted RBP11.43□□□□□ -0.58
ACER3-201ENST00000278544 CRYAAP02489 173 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 TFF1P04155 84 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 VSIG8P0DPA2 414 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 IL7P13232 177 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 NPBWR2P48146 333 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 HAGHLQ6PII5 290 aaPredicted RBP11.43□□□□□ -0.58
ACER3-201ENST00000278544 S100A16Q96FQ6 103 aaKnown RBP11.43□□□□□ -0.58
ACER3-201ENST00000278544 SELENOIQ9C0D9 397 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 SRRQ9GZT4 340 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 V9GYS6 101 aa11.43□□□□□ -0.58
ACER3-201ENST00000278544 HRNRQ86YZ3 2850 aaPredicted RBP11.42□□□□□ -0.58
ACER3-201ENST00000278544 TMEM235A6NFC5 223 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 F8VVB4 439 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 F8VWA3 439 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 IGKV3-15P01624 115 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 CSN2P05814 226 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 CSF3P09919 207 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 NAAAQ02083 359 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 UNC119Q13432 240 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 TRIQKQ629K1 86 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 FGF23Q9GZV9 251 aaPredicted RBP11.42□□□□□ -0.58
ACER3-201ENST00000278544 ABRACLQ9P1F3 81 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 ZNF816-ZNF321PA0A0X1KG74 233 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 FAM221AA4D161 298 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 PITPNBP48739 271 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 ZNF45Q02386 682 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 TAF9Q16594 264 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 CLVS2Q5SYC1 327 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 ZNF826PQ6ZT77 177 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 UTS2BQ765I0 119 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 OR6M1Q8NGM8 313 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 MAFIPQ8WZ33 124 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 DYRK2Q92630 601 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 SLAMF9Q96A28 289 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 CYSLTR2Q9NS75 346 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 LOC100289279A0A1B0GTE1 492 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 CRHP06850 196 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 GNB3P16520 340 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 CCL1P22362 96 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 COLCA1Q6ZS62 124 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 ACOT12Q8WYK0 555 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 SLC25A28Q96A46 364 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 HIST1H2AAQ96QV6 131 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 DMRTA2Q96SC8 542 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 KCNN3Q9UGI6 736 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 ADAM30Q9UKF2 790 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 SLC7A11Q9UPY5 501 aa11.42□□□□□ -0.58
ACER3-201ENST00000278544 ABCA12Q86UK0 2595 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 A6NLC8 198 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 SYNGR1O43759 233 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 UPK1BO75841 260 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 PSMB1P20618 241 aaKnown RBP11.41□□□□□ -0.58
ACER3-201ENST00000278544 PTGFRP43088 359 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 RBP2P50120 134 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 BSPH1Q075Z2 132 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 TIMM23BQ5SRD1 257 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 LYSMD2Q8IV50 215 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 PNLDC1Q8NA58 520 aaKnown RBP11.41□□□□□ -0.58
ACER3-201ENST00000278544 CSMD2Q7Z408 3487 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 ANKRD30BLA7E2S9 258 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 F5H5P2 479 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 SOCS1O15524 211 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 IGLV3-1P01715 115 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 SFTPBP07988 381 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 SPNP16150 400 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 THBS4P35443 961 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 DYNC1I2Q13409 638 aaKnown RBP11.41□□□□□ -0.58
ACER3-201ENST00000278544 PIGYQ3MUY2 71 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 UBE2NLQ5JXB2 153 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 MRGPRGQ86SM5 289 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 OR51F2Q8NH61 342 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 OR52I2Q8NH67 350 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 HPSE2Q8WWQ2 592 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 METTL17Q9H7H0 456 aaPredicted RBP11.41□□□□□ -0.58
ACER3-201ENST00000278544 A3GALT2U3KPV4 340 aa11.41□□□□□ -0.58
ACER3-201ENST00000278544 MEGF11A6BM72 1044 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 AKR7A2O43488 359 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 CTAG2O75638 210 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 RHBDL1O75783 438 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 APOA1P02647 267 aa11.4□□□□□ -0.58
ACER3-201ENST00000278544 HOXD4P09016 255 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms