RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 ATP6V1B2P21281 511 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 CA6P23280 308 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 IL12AP29459 219 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 NTSP30990 170 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 SSTR5P35346 364 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 DRD3P35462 400 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 CDH11P55287 796 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 TAS2R39P59534 338 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 ERVPABLB-1P60509 514 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 SNRPD1P62314 119 aaKnown RBP3.79□□□□□ -1.8
CD44-202ENST00000278385 GNA12Q03113 381 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 ZNF85Q03923 595 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 DLG1Q12959 904 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 GAGE1Q13065 139 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 GAGE4Q13068 117 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 GTF2H2Q13888 395 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 SPIN4Q56A73 249 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 FAM120AOSQ5T036 256 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 HES5Q5TA89 166 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 ATP1A1-AS1Q5TC04 95 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 RWDD4Q6NW29 188 aaKnown RBP3.79□□□□□ -1.8
CD44-202ENST00000278385 ZNF544Q6NX49 715 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 GTF2H2CQ6P1K8 395 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 DNAJC24Q6P3W2 148 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 DCUN1D2Q6PH85 259 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 DUX4L9Q6RFH8 374 aaPredicted RBP3.79□□□□□ -1.8
CD44-202ENST00000278385 FAM131AQ6UXB0 335 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 MBOAT2Q6ZWT7 520 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 TMED4Q7Z7H5 227 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 IFNEQ86WN2 208 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 VKORC1L1Q8N0U8 176 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 EID2Q8N6I1 236 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 WDR31Q8NA23 367 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 OR2A12Q8NGT7 310 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 OR52N1Q8NH53 320 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 JOSD2Q8TAC2 188 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 MRGPRDQ8TDS7 321 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 MOCOSQ96EN8 888 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 ZNF488Q96MN9 340 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 KCTD7Q96MP8 289 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 MS4A4EQ96PG1 132 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 PSMB7Q99436 277 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 FOXC2Q99958 501 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 APOL4Q9BPW4 351 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 OVOL2Q9BRP0 275 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 AGMATQ9BSE5 352 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 CDCA4Q9BXL8 241 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 TRIM15Q9C019 465 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 PCBD2Q9H0N5 130 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 RBKSQ9H477 322 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.79□□□□□ -1.8
CD44-202ENST00000278385 PARVAQ9NVD7 372 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 THUMPD1Q9NXG2 353 aaKnown RBP3.79□□□□□ -1.8
CD44-202ENST00000278385 DUX4Q9UBX2 424 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 RSPH14Q9UHP6 348 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 RAB26Q9ULW5 256 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 NEUROG3Q9Y4Z2 214 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 SNX10Q9Y5X0 201 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 OTOGLQ3ZCN5 2332 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 DENND4CQ5VZ89 1909 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 OBSL1O75147 1896 aa3.79□□□□□ -1.8
CD44-202ENST00000278385 RIF1Q5UIP0 2472 aaKnown RBP3.78□□□□□ -1.8
CD44-202ENST00000278385 SPAARA0A1B0GVQ0 90 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 A6NIZ1 184 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 GJE1A6NN92 205 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 USP27XA6NNY8 438 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 ZNF814B7Z6K7 855 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 H7C2Y5 167 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 DFFAO00273 331 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 KPNA3O00505 521 aaPredicted RBP3.78□□□□□ -1.8
CD44-202ENST00000278385 FCN1O00602 326 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 CDIPTO14735 213 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 ERI3O43414 337 aaKnown RBP3.78□□□□□ -1.8
CD44-202ENST00000278385 SSNA1O43805 119 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 PRKYO43930 277 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 UGT1A9O60656 530 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 SNAP29O95721 258 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 FGF1P05230 155 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 CD5P06127 495 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 CTSLP07711 333 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 NBEAP1P0C6P0 100 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 T-ENOLP0DO92 83 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 LIPCP11150 499 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 SLC2A1P11166 492 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 UGT2B7P16662 529 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 CRABP1P29762 137 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 HTR1FP30939 366 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 OR3A2P47893 321 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 ERFP50548 548 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 P2RY4P51582 365 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 PRKXP51817 358 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 TAS2R31P59538 309 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 ABCE1P61221 599 aaKnown RBP3.78□□□□□ -1.8
CD44-202ENST00000278385 RPS21P63220 83 aaKnown RBP3.78□□□□□ -1.8
CD44-202ENST00000278385 PAFAH1B2P68402 229 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 RPL19P84098 196 aaKnown RBP3.78□□□□□ -1.8
CD44-202ENST00000278385 ACVR1Q04771 509 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 IL18R1Q13478 541 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 GUSBP1Q15486 140 aa3.78□□□□□ -1.8
CD44-202ENST00000278385 SPA17Q15506 151 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms