RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 COMMD2Q86X83 199 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 OR5T2Q8NGG2 359 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 OR8J1Q8NGP2 316 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 TAF15Q92804 592 aaKnown RBP eCLIP11.95□□□□□ -0.5
HMGN3-201ENST00000275036 EME1Q96AY2 570 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 CCL13Q99616 98 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 ABCB9Q9NP78 766 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 R4GMQ9 66 aa11.95□□□□□ -0.5
HMGN3-201ENST00000275036 A0A1B0GTI1 187 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 A0A1W2PQL4 384 aaPredicted RBP11.94□□□□□ -0.5
HMGN3-201ENST00000275036 LOC110117498-PIK3R3F6TDL0 507 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 TMPRSS2O15393 492 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 AKR7A2O43488 359 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 RHBDL1O75783 438 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 SFTPBP07988 381 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 SELLP14151 372 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 MMP9P14780 707 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 EGR3Q06889 387 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 MICBQ29980 383 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 ZNF684Q5T5D7 378 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 STUMQ69YW2 141 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 C9orf139Q6ZV77 190 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 KCTD8Q6ZWB6 473 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 BTN2A1Q7KYR7 527 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 ELMOD2Q8IZ81 293 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 FAM216BQ8N7L0 139 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 OR10Z1Q8NGY1 313 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 OR51I2Q9H344 312 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 SNTG1Q9NSN8 517 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 USE1Q9NZ43 259 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 OR52A1Q9UKL2 312 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 GTF2A1LQ9UNN4 478 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 SLC22A13Q9Y226 551 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 PIGLQ9Y2B2 252 aa11.94□□□□□ -0.5
HMGN3-201ENST00000275036 ZNF732B4DXR9 585 aa11.93□□□□□ -0.5
HMGN3-201ENST00000275036 P2RY10O00398 339 aa11.93□□□□□ -0.5
HMGN3-201ENST00000275036 DHRS3O75911 302 aa11.93□□□□□ -0.5
HMGN3-201ENST00000275036 RPP14O95059 124 aaKnown RBP11.93□□□□□ -0.5
HMGN3-201ENST00000275036 ATP6V1B1P15313 513 aa11.93□□□□□ -0.5
HMGN3-201ENST00000275036 ALDH3A2P51648 485 aa11.93□□□□□ -0.5
HMGN3-201ENST00000275036 RIPPLY1Q0D2K3 151 aa11.93□□□□□ -0.5
HMGN3-201ENST00000275036 CEACAM21Q3KPI0 293 aa11.93□□□□□ -0.5
HMGN3-201ENST00000275036 ZIK1Q3SY52 487 aaPredicted RBP11.93□□□□□ -0.5
HMGN3-201ENST00000275036 BCL2L15Q5TBC7 163 aa11.93□□□□□ -0.5
HMGN3-201ENST00000275036 CD276Q5ZPR3 534 aa11.93□□□□□ -0.5
HMGN3-201ENST00000275036 ZFP1Q6P2D0 407 aa11.93□□□□□ -0.5
HMGN3-201ENST00000275036 BRD3OSQ6XYD6 125 aa11.93□□□□□ -0.5
HMGN3-201ENST00000275036 MOB3CQ70IA8 216 aa11.93□□□□□ -0.5
HMGN3-201ENST00000275036 ST8SIA4Q92187 359 aa11.93□□□□□ -0.5
HMGN3-201ENST00000275036 GCDHQ92947 438 aaPredicted RBP11.93□□□□□ -0.5
HMGN3-201ENST00000275036 HRASLS5Q96KN8 279 aa11.93□□□□□ -0.5
HMGN3-201ENST00000275036 RAB3IPQ96QF0 476 aaPredicted RBP11.93□□□□□ -0.5
HMGN3-201ENST00000275036 TBX15Q96SF7 602 aa11.93□□□□□ -0.5
HMGN3-201ENST00000275036 MS4A7Q9GZW8 240 aaPredicted RBP11.93□□□□□ -0.5
HMGN3-201ENST00000275036 MOB1AQ9H8S9 216 aa11.93□□□□□ -0.5
HMGN3-201ENST00000275036 V9GYS6 101 aa11.93□□□□□ -0.5
HMGN3-201ENST00000275036 A6NIN4 97 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 ZNF879B4DU55 563 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 OR2T7P0C7T2 308 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 PRTN3P24158 256 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 TGM4P49221 684 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 CDC42P60953 191 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 GNG3P63215 75 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 ZNF85Q03923 595 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 AWAT1Q58HT5 328 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 ATPAF1Q5TC12 328 aaPredicted RBP11.92□□□□□ -0.5
HMGN3-201ENST00000275036 ZBTB37Q5TC79 503 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 PLCXD3Q63HM9 321 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 TMEM42Q69YG0 159 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 Q6ZSR3 168 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 THAP5Q7Z6K1 395 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 CATSPERDQ86XM0 798 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 CBR4Q8N4T8 237 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 YIPF7Q8N8F6 280 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 OR10H4Q8NGA5 316 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 OR5A2Q8NGI9 324 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 OR14K1Q8NGZ2 314 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 OR2T27Q8NH04 317 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 RORBQ92753 470 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 RNF166Q96A37 237 aaPredicted RBP11.92□□□□□ -0.5
HMGN3-201ENST00000275036 C12orf43Q96C57 262 aaKnown RBP11.92□□□□□ -0.5
HMGN3-201ENST00000275036 HIST1H2AAQ96QV6 131 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 MBOAT4Q96T53 435 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 PCGF1Q9BSM1 259 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 SIRPDQ9H106 197 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 AASSQ9UDR5 926 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 ENPP5Q9UJA9 477 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 SNX5Q9Y5X3 404 aa11.92□□□□□ -0.5
HMGN3-201ENST00000275036 DSCAML1Q8TD84 2053 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 METTL15A6NJ78 407 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 H3BSH0 61 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 EBAG9O00559 213 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 ENTPD6O75354 484 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 MTRF1O75570 445 aaKnown RBP11.91□□□□□ -0.5
HMGN3-201ENST00000275036 NRASP01111 189 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 KRT8P05787 483 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 LIPFP07098 398 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 CCL1P22362 96 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 ISL1P61371 349 aa11.91□□□□□ -0.5
HMGN3-201ENST00000275036 BAMBIQ13145 260 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms