RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 TMEM204Q9BSN7 226 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 PLEKHA1Q9HB21 404 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 MTORP42345 2549 aa21.18■□□□□ 0.98
SSBP4-201ENST00000270061 A6NIN4 97 aa21.17■□□□□ 0.98
SSBP4-201ENST00000270061 CTDSPLO15194 276 aa21.17■□□□□ 0.98
SSBP4-201ENST00000270061 ALDOBP05062 364 aa21.17■□□□□ 0.98
SSBP4-201ENST00000270061 RANBP1P43487 201 aa21.17■□□□□ 0.98
SSBP4-201ENST00000270061 RAB1AP62820 205 aa21.17■□□□□ 0.98
SSBP4-201ENST00000270061 NCMAPQ5T1S8 102 aa21.17■□□□□ 0.98
SSBP4-201ENST00000270061 NANOS1Q8WY41 292 aaKnown RBP21.17■□□□□ 0.98
SSBP4-201ENST00000270061 BOD1Q96IK1 185 aa21.17■□□□□ 0.98
SSBP4-201ENST00000270061 CCL19Q99731 98 aa21.17■□□□□ 0.98
SSBP4-201ENST00000270061 METTL17Q9H7H0 456 aaPredicted RBP21.17■□□□□ 0.98
SSBP4-201ENST00000270061 RHBDL2Q9NX52 303 aa21.17■□□□□ 0.98
SSBP4-201ENST00000270061 B3GNT2Q9NY97 397 aa21.17■□□□□ 0.98
SSBP4-201ENST00000270061 CGGBP1Q9UFW8 167 aaPredicted RBP21.17■□□□□ 0.98
SSBP4-201ENST00000270061 ZNF503-AS2A6NEH8 195 aa21.16■□□□□ 0.98
SSBP4-201ENST00000270061 MNDAP41218 407 aa21.16■□□□□ 0.98
SSBP4-201ENST00000270061 POU3F4P49335 361 aa21.16■□□□□ 0.98
SSBP4-201ENST00000270061 TGFBR3Q03167 851 aa21.16■□□□□ 0.98
SSBP4-201ENST00000270061 ASAH1Q13510 395 aa21.16■□□□□ 0.98
SSBP4-201ENST00000270061 SEZ6L2Q6UXD5 910 aa21.16■□□□□ 0.98
SSBP4-201ENST00000270061 UTS2BQ765I0 119 aa21.16■□□□□ 0.98
SSBP4-201ENST00000270061 CCDC36Q8IYA8 594 aa21.16■□□□□ 0.98
SSBP4-201ENST00000270061 OR5AS1Q8N127 324 aa21.16■□□□□ 0.98
SSBP4-201ENST00000270061 JAGN1Q8N5M9 183 aa21.16■□□□□ 0.98
SSBP4-201ENST00000270061 OR13C9Q8NGT0 318 aa21.16■□□□□ 0.98
SSBP4-201ENST00000270061 PP6455Q8WZ26 134 aa21.16■□□□□ 0.98
SSBP4-201ENST00000270061 RNF115Q9Y4L5 304 aa21.16■□□□□ 0.98
SSBP4-201ENST00000270061 USF3Q68DE3 2245 aa21.16■□□□□ 0.98
SSBP4-201ENST00000270061 CD3EP07766 207 aa21.15■□□□□ 0.98
SSBP4-201ENST00000270061 CD79AP11912 226 aa21.15■□□□□ 0.98
SSBP4-201ENST00000270061 MMP15P51511 669 aa21.15■□□□□ 0.98
SSBP4-201ENST00000270061 TRIQKQ629K1 86 aa21.15■□□□□ 0.98
SSBP4-201ENST00000270061 OR52N4Q8NGI2 321 aa21.15■□□□□ 0.98
SSBP4-201ENST00000270061 REEP6Q96HR9 211 aa21.15■□□□□ 0.98
SSBP4-201ENST00000270061 FAIMQ9NVQ4 179 aa21.15■□□□□ 0.98
SSBP4-201ENST00000270061 LOC100509620A0A075B734 347 aa21.15■□□□□ 0.98
SSBP4-201ENST00000270061 BSPH1Q075Z2 132 aa21.15■□□□□ 0.98
SSBP4-201ENST00000270061 GABRA6Q16445 453 aa21.15■□□□□ 0.98
SSBP4-201ENST00000270061 TBRG1Q3YBR2 411 aa21.15■□□□□ 0.98
SSBP4-201ENST00000270061 HACD4Q5VWC8 232 aa21.15■□□□□ 0.98
SSBP4-201ENST00000270061 DTX3Q8N9I9 347 aa21.15■□□□□ 0.98
SSBP4-201ENST00000270061 C19orf18Q8NEA5 215 aa21.15■□□□□ 0.98
SSBP4-201ENST00000270061 PTX4Q96A99 478 aa21.15■□□□□ 0.98
SSBP4-201ENST00000270061 NOX3Q9HBY0 568 aa21.15■□□□□ 0.98
SSBP4-201ENST00000270061 XRCC2O43543 280 aa21.14■□□□□ 0.97
SSBP4-201ENST00000270061 HOXB1P14653 301 aaPredicted RBP21.14■□□□□ 0.97
SSBP4-201ENST00000270061 ARSBP15848 533 aa21.14■□□□□ 0.97
SSBP4-201ENST00000270061 PLP2Q04941 152 aa21.14■□□□□ 0.97
SSBP4-201ENST00000270061 GDPD3Q7L5L3 318 aa21.14■□□□□ 0.97
SSBP4-201ENST00000270061 C15orf40Q8WUR7 153 aa21.14■□□□□ 0.97
SSBP4-201ENST00000270061 AKAP1Q92667 903 aaKnown RBP eCLIP21.14■□□□□ 0.97
SSBP4-201ENST00000270061 SPSB4Q96A44 273 aa21.14■□□□□ 0.97
SSBP4-201ENST00000270061 CNTD2Q9H8S5 307 aa21.14■□□□□ 0.97
SSBP4-201ENST00000270061 TMEM272A0A1B0GTI8 110 aa21.13■□□□□ 0.97
SSBP4-201ENST00000270061 HS3ST1O14792 307 aa21.13■□□□□ 0.97
SSBP4-201ENST00000270061 LDLRAD4O15165 306 aa21.13■□□□□ 0.97
SSBP4-201ENST00000270061 GSTZ1O43708 216 aaPredicted RBP21.13■□□□□ 0.97
SSBP4-201ENST00000270061 STOMP27105 288 aa21.13■□□□□ 0.97
SSBP4-201ENST00000270061 HIKESHIQ53FT3 197 aa21.13■□□□□ 0.97
SSBP4-201ENST00000270061 TGIF2LYQ8IUE0 185 aa21.13■□□□□ 0.97
SSBP4-201ENST00000270061 C1orf162Q8NEQ5 155 aaPredicted RBP21.13■□□□□ 0.97
SSBP4-201ENST00000270061 SEMA6DQ8NFY4 1073 aa21.13■□□□□ 0.97
SSBP4-201ENST00000270061 THAP7Q9BT49 309 aaPredicted RBP21.13■□□□□ 0.97
SSBP4-201ENST00000270061 CHST5Q9GZS9 411 aa21.13■□□□□ 0.97
SSBP4-201ENST00000270061 DPRXA6NFQ7 191 aa21.13■□□□□ 0.97
SSBP4-201ENST00000270061 MAGEB3O15480 346 aa21.13■□□□□ 0.97
SSBP4-201ENST00000270061 SMPD2O60906 423 aa21.13■□□□□ 0.97
SSBP4-201ENST00000270061 GSG1Q2KHT4 349 aa21.13■□□□□ 0.97
SSBP4-201ENST00000270061 OR4D6Q8NGJ1 314 aa21.13■□□□□ 0.97
SSBP4-201ENST00000270061 ITFG2Q969R8 447 aa21.13■□□□□ 0.97
SSBP4-201ENST00000270061 RFT1Q96AA3 541 aa21.13■□□□□ 0.97
SSBP4-201ENST00000270061 POM121L2Q96KW2 1035 aa21.13■□□□□ 0.97
SSBP4-201ENST00000270061 TBCCD1Q9NVR7 557 aa21.13■□□□□ 0.97
SSBP4-201ENST00000270061 NPAP1Q9NZP6 1156 aa21.13■□□□□ 0.97
SSBP4-201ENST00000270061 PIGLQ9Y2B2 252 aa21.13■□□□□ 0.97
SSBP4-201ENST00000270061 ZNF93P35789 620 aaPredicted RBP21.12■□□□□ 0.97
SSBP4-201ENST00000270061 MAP2K3P46734 347 aa21.12■□□□□ 0.97
SSBP4-201ENST00000270061 RIPPLY1Q0D2K3 151 aa21.12■□□□□ 0.97
SSBP4-201ENST00000270061 ADAM5Q6NVV9 412 aa21.12■□□□□ 0.97
SSBP4-201ENST00000270061 ZNF584Q8IVC4 421 aa21.12■□□□□ 0.97
SSBP4-201ENST00000270061 ZNF611Q8N823 705 aa21.12■□□□□ 0.97
SSBP4-201ENST00000270061 TRIM63Q969Q1 353 aa21.12■□□□□ 0.97
SSBP4-201ENST00000270061 ZNF75AQ96N20 296 aa21.12■□□□□ 0.97
SSBP4-201ENST00000270061 SLC25A15Q9Y619 301 aa21.12■□□□□ 0.97
SSBP4-201ENST00000270061 RTTNQ86VV8 2226 aa21.12■□□□□ 0.97
SSBP4-201ENST00000270061 IGKV1-9A0A0C4DH69 117 aa21.11■□□□□ 0.97
SSBP4-201ENST00000270061 A0A1W2PR80 420 aa21.11■□□□□ 0.97
SSBP4-201ENST00000270061 PLA2G10O15496 165 aa21.11■□□□□ 0.97
SSBP4-201ENST00000270061 XRCC3O43542 346 aa21.11■□□□□ 0.97
SSBP4-201ENST00000270061 CDK2P24941 298 aa21.11■□□□□ 0.97
SSBP4-201ENST00000270061 PTH2RP49190 550 aa21.11■□□□□ 0.97
SSBP4-201ENST00000270061 PLA2G7Q13093 441 aa21.11■□□□□ 0.97
SSBP4-201ENST00000270061 C17orf78Q8N4C9 275 aa21.11■□□□□ 0.97
SSBP4-201ENST00000270061 OR2AE1Q8NHA4 323 aa21.11■□□□□ 0.97
SSBP4-201ENST00000270061 MRPS7Q9Y2R9 242 aaKnown RBP21.11■□□□□ 0.97
SSBP4-201ENST00000270061 hCG_38984A0A1B0GV85 526 aa21.1■□□□□ 0.97
SSBP4-201ENST00000270061 BPNT1O95861 308 aa21.1■□□□□ 0.97
SSBP4-201ENST00000270061 FAHP16930 419 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms