RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 PILRBQ9UKJ0 227 aa13.72□□□□□ -0.21
TIMP3-201ENST00000266085 AQP7P3A6NL99 342 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 OR2B11Q5JQS5 317 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 STPG1Q5TH74 334 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 FAM185AQ8N0U4 392 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 MFSD4AQ8N468 514 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 SLC30A7Q8NEW0 376 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 OR4S1Q8NGB4 309 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 APOBEC4Q8WW27 367 aaKnown RBP13.71□□□□□ -0.21
TIMP3-201ENST00000266085 TMEM74BQ9NUR3 256 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 H3BMH7 237 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 RAB27BO00194 218 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 OIP5O43482 229 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 LYZL6O75951 148 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 JTBO76095 146 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 PTHLHP12272 177 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 OR2T2Q6IF00 324 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 EXTL1Q92935 676 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 VWCEQ96DN2 955 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 SDHBP21912 280 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 PTGFRP43088 359 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 MAGEA5P43359 124 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 NKX6-1P78426 367 aaPredicted RBP13.71□□□□□ -0.21
TIMP3-201ENST00000266085 MESTQ5EB52 335 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 DMKNQ6E0U4 476 aaPredicted RBP13.71□□□□□ -0.21
TIMP3-201ENST00000266085 LYG2Q86SG7 212 aa13.71□□□□□ -0.21
TIMP3-201ENST00000266085 LIN7CQ9NUP9 197 aaKnown RBP13.71□□□□□ -0.21
TIMP3-201ENST00000266085 MRM2Q9UI43 246 aaKnown RBP13.71□□□□□ -0.21
TIMP3-201ENST00000266085 HEXAP06865 529 aa13.71□□□□□ -0.22
TIMP3-201ENST00000266085 ZNF83P51522 516 aa13.71□□□□□ -0.22
TIMP3-201ENST00000266085 MVDP53602 400 aa13.71□□□□□ -0.22
TIMP3-201ENST00000266085 SCAND1P57086 179 aa13.71□□□□□ -0.22
TIMP3-201ENST00000266085 BTN1A1Q13410 526 aa13.71□□□□□ -0.22
TIMP3-201ENST00000266085 OR2W3Q7Z3T1 314 aa13.71□□□□□ -0.22
TIMP3-201ENST00000266085 GLCCI1Q86VQ1 547 aa13.71□□□□□ -0.22
TIMP3-201ENST00000266085 CATSPERDQ86XM0 798 aa13.71□□□□□ -0.22
TIMP3-201ENST00000266085 FBXO17Q96EF6 278 aa13.71□□□□□ -0.22
TIMP3-201ENST00000266085 ARV1Q9H2C2 271 aa13.71□□□□□ -0.22
TIMP3-201ENST00000266085 OR5V1Q9UGF6 321 aa13.71□□□□□ -0.22
TIMP3-201ENST00000266085 ZNF626Q68DY1 528 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 OR2G3Q8NGZ4 309 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 DAZAP1Q96EP5 407 aaKnown RBP13.7□□□□□ -0.22
TIMP3-201ENST00000266085 MN1Q10571 1320 aaPredicted RBP13.7□□□□□ -0.22
TIMP3-201ENST00000266085 A0A1W2PR77 199 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 TAAR5O14804 337 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 LRP3O75074 770 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 CNIH1O95406 144 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 OR8U8P0C7N1 319 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 TMEM128Q5BJH2 165 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 Q8IYB0 196 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 KCNRGQ8N5I3 272 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 ADPRHL1Q8NDY3 354 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 TINAGL1Q9GZM7 467 aaPredicted RBP13.7□□□□□ -0.22
TIMP3-201ENST00000266085 CHST6Q9GZX3 395 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 AKAP6Q13023 2319 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 DBPQ10586 325 aaPredicted RBP13.7□□□□□ -0.22
TIMP3-201ENST00000266085 C3AR1Q16581 482 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 ALKBH6Q3KRA9 238 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 LOXL4Q96JB6 756 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 RAB33BQ9H082 229 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 MTFP1Q9UDX5 166 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 BTBD17A6NE02 478 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 CSF2RBP32927 897 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 SLC25A30Q5SVS4 291 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 SSX9Q7RTT3 188 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 SFT2D1Q8WV19 159 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 ASB10Q8WXI3 467 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 MARC2Q969Z3 335 aa13.7□□□□□ -0.22
TIMP3-201ENST00000266085 SF3B5Q9BWJ5 86 aaKnown RBP13.7□□□□□ -0.22
TIMP3-201ENST00000266085 ANKRD34BA5PLL1 514 aa13.69□□□□□ -0.22
TIMP3-201ENST00000266085 AQP8O94778 261 aa13.69□□□□□ -0.22
TIMP3-201ENST00000266085 IGKV1D-16P01601 117 aa13.69□□□□□ -0.22
TIMP3-201ENST00000266085 DEFA4P12838 97 aa13.69□□□□□ -0.22
TIMP3-201ENST00000266085 CSRP3P50461 194 aa13.69□□□□□ -0.22
TIMP3-201ENST00000266085 HMGN3Q15651 99 aa13.69□□□□□ -0.22
TIMP3-201ENST00000266085 SPANXN5Q5MJ07 72 aa13.69□□□□□ -0.22
TIMP3-201ENST00000266085 GPA33Q99795 319 aa13.69□□□□□ -0.22
TIMP3-201ENST00000266085 ADAT1Q9BUB4 502 aaKnown RBP13.69□□□□□ -0.22
TIMP3-201ENST00000266085 FAM117AQ9C073 453 aa13.69□□□□□ -0.22
TIMP3-201ENST00000266085 PYCARD-AS1I3L0S3 204 aa13.69□□□□□ -0.22
TIMP3-201ENST00000266085 TGM6O95932 706 aa13.69□□□□□ -0.22
TIMP3-201ENST00000266085 TNFRSF1AP19438 455 aa13.69□□□□□ -0.22
TIMP3-201ENST00000266085 ACAA2P42765 397 aaKnown RBP13.69□□□□□ -0.22
TIMP3-201ENST00000266085 SNTB1Q13884 538 aaKnown RBP13.69□□□□□ -0.22
TIMP3-201ENST00000266085 TESK1Q15569 626 aa13.69□□□□□ -0.22
TIMP3-201ENST00000266085 YIPF5Q969M3 257 aa13.69□□□□□ -0.22
TIMP3-201ENST00000266085 SCN2AQ99250 2005 aa13.69□□□□□ -0.22
TIMP3-201ENST00000266085 GMDSO60547 372 aa13.69□□□□□ -0.22
TIMP3-201ENST00000266085 IGHA1P01876 353 aa13.69□□□□□ -0.22
TIMP3-201ENST00000266085 PDGFAP04085 211 aa13.69□□□□□ -0.22
TIMP3-201ENST00000266085 OR10X1Q8NGY0 326 aa13.69□□□□□ -0.22
TIMP3-201ENST00000266085 TMED6Q8WW62 240 aa13.69□□□□□ -0.22
TIMP3-201ENST00000266085 GALMQ96C23 342 aa13.69□□□□□ -0.22
TIMP3-201ENST00000266085 SCARF2Q96GP6 870 aaPredicted RBP13.69□□□□□ -0.22
TIMP3-201ENST00000266085 SPRY3O43610 288 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 CTSBP07858 339 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 ACSM4P0C7M7 580 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 CCL2P13500 99 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 NLRC3Q7RTR2 1065 aa13.68□□□□□ -0.22
TIMP3-201ENST00000266085 CDC20BQ86Y33 519 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms