RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 OR1N1Q8NGS0 311 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 ADAMTS15Q8TE58 950 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 METTL21AQ8WXB1 218 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 LPAR4Q99677 370 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 PRRT1Q99946 306 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 TMEM74BQ9NUR3 256 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 UNC13CQ8NB66 2214 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 EIF1AYO14602 144 aaKnown RBP7.77□□□□□ -1.17
VAPB-201ENST00000265619 TGOLN2O43493 480 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 SCGNO76038 276 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 PRH1P02810 166 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 SLC6A6P31641 620 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 RPL4P36578 427 aaKnown RBP7.77□□□□□ -1.17
VAPB-201ENST00000265619 EIF1AXP47813 144 aaKnown RBP7.77□□□□□ -1.17
VAPB-201ENST00000265619 SOX8P57073 446 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 ERVFC1-1P60608 527 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 FOXF1Q12946 379 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 KCNMB1Q16558 191 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 TMEM92Q6UXU6 159 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 TMEM182Q6ZP80 229 aaPredicted RBP7.77□□□□□ -1.17
VAPB-201ENST00000265619 ZNF547Q8IVP9 402 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 SFTPA2Q8IWL1 248 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 OR4D6Q8NGJ1 314 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 FAM213BQ8TBF2 198 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 ELSPBP1Q96BH3 223 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 ALKBH3Q96Q83 286 aaPredicted RBP7.77□□□□□ -1.17
VAPB-201ENST00000265619 SDF2Q99470 211 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 FOXQ1Q9C009 403 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 DNAJC4Q9NNZ3 241 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 CES1P1Q9UKY3 287 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 LIPGQ9Y5X9 500 aa7.77□□□□□ -1.17
VAPB-201ENST00000265619 IGKV1-8A0A0C4DH67 115 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 B4E171 279 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 GLRA1P23415 457 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 BMI1P35226 326 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 RND3P61587 244 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 OR5I1Q13606 314 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 CLEC12BQ2HXU8 276 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 ZNF260Q3ZCT1 412 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 WDR73Q6P4I2 378 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 TMEM64Q6YI46 380 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 DPY19L4Q7Z388 723 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 ZNF429Q86V71 674 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 COX18Q8N8Q8 333 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 OR2AJ1Q8NGZ0 328 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 ZNF417Q8TAU3 575 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 RNASEH2CQ8TDP1 164 aaKnown RBP7.76□□□□□ -1.17
VAPB-201ENST00000265619 FAM3CQ92520 227 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 C5orf34Q96MH7 638 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 RTBDNQ9BSG5 229 aaPredicted RBP7.76□□□□□ -1.17
VAPB-201ENST00000265619 NUDT9Q9BW91 350 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 NMNAT2Q9BZQ4 307 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 ADAP2Q9NPF8 381 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 PHPT1Q9NRX4 125 aaPredicted RBP7.76□□□□□ -1.17
VAPB-201ENST00000265619 RXFP3Q9NSD7 469 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 LSM5Q9Y4Y9 91 aaKnown RBP7.76□□□□□ -1.17
VAPB-201ENST00000265619 KIAA2026Q5HYC2 2103 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 A0A1B0GWA3 101 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 FAM221AA4D161 298 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 SYT7O43581 403 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 CDC14BO60729 498 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 GLIPR1P48060 266 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 TNFSF10P50591 281 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 ID2Q02363 134 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 SSBP1Q04837 148 aaKnown RBP7.76□□□□□ -1.17
VAPB-201ENST00000265619 HIKESHIQ53FT3 197 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 SLC35D2Q76EJ3 337 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 HOGA1Q86XE5 327 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 CHST4Q8NCG5 386 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 OR56A1Q8NGH5 318 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 PATE1Q8WXA2 126 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 URM1Q9BTM9 101 aaKnown RBP7.76□□□□□ -1.17
VAPB-201ENST00000265619 OR11A1Q9GZK7 315 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 S1PR5Q9H228 398 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 CKLFQ9UBR5 152 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 EP300Q09472 2414 aaPredicted RBP7.76□□□□□ -1.17
VAPB-201ENST00000265619 TMEM210A6NLX4 147 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 K7EPK0 472 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 SRP19P09132 144 aaKnown RBP7.76□□□□□ -1.17
VAPB-201ENST00000265619 METTL15P1P0C7V9 234 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 MMP16P51512 607 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 GNB2P62879 340 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 FAM3AP98173 230 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 PLXDC2Q6UX71 529 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 ZNF573Q86YE8 665 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 FAM71E2Q8N5Q1 922 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 AQP3Q92482 292 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 MRGPRX4Q96LA9 322 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 ZNF681Q96N22 645 aa7.76□□□□□ -1.17
VAPB-201ENST00000265619 MTHFD2LQ9H903 347 aaPredicted RBP7.76□□□□□ -1.17
VAPB-201ENST00000265619 LRRK1Q38SD2 2015 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 LOC101059948A0A1B0GTJ6 334 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 CCL25O15444 150 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 XRCC2O43543 280 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 ZNF217O75362 1048 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 SFT2D2O95562 160 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 FGF5P12034 268 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 TBPP20226 339 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 PLA2G5P39877 138 aa7.75□□□□□ -1.17
VAPB-201ENST00000265619 EMDP50402 254 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms