RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 TSC2P49815 1807 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 PRRC2CQ9Y520 2896 aaKnown RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 IFITM5A6NNB3 132 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 XRCC3O43542 346 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 PTGER4P35408 488 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 TNFRSF4P43489 277 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 WDR73Q6P4I2 378 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 PGBD5Q8N414 524 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 SLC38A9Q8NBW4 561 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 SIRT5Q9NXA8 310 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 NXT1Q9UKK6 140 aaKnown RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 COL16A1Q07092 1604 aaPredicted RBP5.17□□□□□ -1.58
VCAN-201ENST00000265077 C4orf47A7E2U8 309 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 MPGP29372 298 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 DPPA3Q6W0C5 159 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 PRICKLE2Q7Z3G6 844 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 ACY3Q96HD9 319 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 CTDSP1Q9GZU7 261 aa5.17□□□□□ -1.58
VCAN-201ENST00000265077 SOCS6O14544 535 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 TIMP1P01033 207 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 GLB1P16278 677 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 OTX2P32243 289 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 CD200P41217 278 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 C19orf47Q8N9M1 422 aaKnown RBP5.16□□□□□ -1.58
VCAN-201ENST00000265077 CLEC1AQ8NC01 280 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 C14orf144Q96I85 54 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 UTP23Q9BRU9 249 aaKnown RBP5.16□□□□□ -1.58
VCAN-201ENST00000265077 STRCP1A6NGW2 1772 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 CXorf51AA0A1B0GTR3 108 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 SLC6A12P48065 614 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 LDLRAD1Q5T700 205 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 METRNLQ641Q3 311 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 ABHD17CQ6PCB6 329 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 PAQR9Q6ZVX9 377 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 PRR18Q8N4B5 295 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 IL22RA1Q8N6P7 574 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 PLPP7Q8NBV4 271 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 NAT6Q93015 286 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 SEH1LQ96EE3 360 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 KIR2DS1A0A191URI9 304 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 GFYI3L273 518 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 RRP8O43159 456 aaKnown RBP5.16□□□□□ -1.58
VCAN-201ENST00000265077 B4GALT3O60512 393 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 KIR2DS4P43632 304 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 SRYQ05066 204 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 KIR2DS1Q14954 304 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 HERPUD1Q15011 391 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 TMEM176BQ3YBM2 270 aaPredicted RBP5.16□□□□□ -1.58
VCAN-201ENST00000265077 FAAP20Q6NZ36 180 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 PNPLA1Q8N8W4 532 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 JAM3Q9BX67 310 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 OR2J1Q9GZK6 312 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 PLK3Q9H4B4 646 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 SLC25A37Q9NYZ2 338 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 SNRPCP09234 159 aaKnown RBP5.16□□□□□ -1.58
VCAN-201ENST00000265077 C1orf61Q13536 156 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 BTNL8Q6UX41 500 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 ESPNLQ6ZVH7 1005 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 NTNG1Q9Y2I2 539 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 TRPM7Q96QT4 1865 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 SLC5A10A0PJK1 596 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 POU3F2P20265 443 aaPredicted RBP5.16□□□□□ -1.58
VCAN-201ENST00000265077 H1FNTQ75WM6 255 aaPredicted RBP5.16□□□□□ -1.58
VCAN-201ENST00000265077 ZNF761Q86XN6 746 aaPredicted RBP5.16□□□□□ -1.58
VCAN-201ENST00000265077 ZNF687Q8N1G0 1237 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 PHOSPHO2Q8TCD6 241 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 UBTD1Q9HAC8 227 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 PLEKHA2Q9HB19 425 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 YPEL5P62699 121 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 DUSP8Q13202 625 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 GLIPR1L1Q6UWM5 242 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 OR1P1Q8NH06 330 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 MRGPRDQ8TDS7 321 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 PIGCQ92535 297 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 FGF20Q9NP95 211 aaPredicted RBP5.16□□□□□ -1.58
VCAN-201ENST00000265077 B3GAT1Q9P2W7 334 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 FTSJ1Q9UET6 329 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 AUP1Q9Y679 476 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 DBHP09172 617 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 FOLR2P14207 255 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 MUC1P15941 1255 aaPredicted RBP5.16□□□□□ -1.58
VCAN-201ENST00000265077 MRPS21P82921 87 aaKnown RBP5.16□□□□□ -1.58
VCAN-201ENST00000265077 MEP1BQ16820 701 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 NPSR1Q6W5P4 371 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 C12orf54Q6X4T0 127 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 MENTQ9BUN1 341 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 SSR4P51571 173 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 DOK3Q7L591 496 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 NIT1Q86X76 327 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 OR11H4Q8NGC9 324 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 IL1F10Q8WWZ1 152 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 C2orf50Q96LR7 162 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 NXF5Q9H1B4 397 aaKnown RBP5.16□□□□□ -1.58
VCAN-201ENST00000265077 AHDC1Q5TGY3 1603 aaPredicted RBP5.16□□□□□ -1.58
VCAN-201ENST00000265077 DPTQ07507 201 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 CLN3Q13286 438 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 IKZF1Q13422 519 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 PLGLAQ15195 96 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 CMTM4Q8IZR5 234 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 MISP3Q96FF7 219 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms