RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 PSENENQ9NZ42 101 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 TREM2Q9NZC2 230 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 CD96P40200 585 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 FBXW9Q5XUX1 488 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 CCDC144NLQ6NUI1 221 aa12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 OPN3Q9H1Y3 402 aaPredicted RBP12.09□□□□□ -0.47
PDGFRB-201ENST00000261799 MN1Q10571 1320 aaPredicted RBP12.08□□□□□ -0.47
PDGFRB-201ENST00000261799 DEFB108AA8MXU0 73 aa12.08□□□□□ -0.47
PDGFRB-201ENST00000261799 ACKR3P25106 362 aa12.08□□□□□ -0.47
PDGFRB-201ENST00000261799 OPRL1P41146 370 aa12.08□□□□□ -0.47
PDGFRB-201ENST00000261799 SOWAHCQ53LP3 525 aaPredicted RBP12.08□□□□□ -0.47
PDGFRB-201ENST00000261799 SLC25A30Q5SVS4 291 aa12.08□□□□□ -0.47
PDGFRB-201ENST00000261799 OR4F17Q8NGA8 305 aa12.08□□□□□ -0.47
PDGFRB-201ENST00000261799 OR13C8Q8NGS7 320 aa12.08□□□□□ -0.47
PDGFRB-201ENST00000261799 OR4F5Q8NH21 305 aa12.08□□□□□ -0.47
PDGFRB-201ENST00000261799 ASB10Q8WXI3 467 aa12.08□□□□□ -0.47
PDGFRB-201ENST00000261799 OR4F4Q96R69 305 aa12.08□□□□□ -0.47
PDGFRB-201ENST00000261799 GMPR2Q9P2T1 348 aaKnown RBP12.08□□□□□ -0.47
PDGFRB-201ENST00000261799 RAE1P78406 368 aaKnown RBP12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 TMEM268Q5VZI3 342 aa12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 ERGIC1Q969X5 290 aa12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 TCHHQ07283 1943 aa12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 SCN9AQ15858 1988 aa12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 CDK2AP1O14519 115 aa12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 IFNL4K9M1U5 179 aa12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 OPRK1P41145 380 aa12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 NDUFA6P56556 154 aa12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 CMPK2Q5EBM0 449 aa12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 DNASE2BQ8WZ79 361 aa12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 ZNF501Q96CX3 271 aaPredicted RBP12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 PCGF1Q9BSM1 259 aa12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 GABARAPL3Q9BY60 117 aa12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 SERPINE3A8MV23 424 aa12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 SSSCA1O60232 199 aa12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 FBP1P09467 338 aa12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 IAPPP10997 89 aa12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 TGM1P22735 817 aa12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 S100A4P26447 101 aaKnown RBP12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 SSTP61278 116 aa12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 SEC22AQ96IW7 307 aa12.08□□□□□ -0.48
PDGFRB-201ENST00000261799 FAM157AC9JC47 383 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 MBP02144 154 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 UBE2KP61086 200 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 NAAAQ02083 359 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 ZNF425Q6IV72 752 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 BHLHA9Q7RTU4 235 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 SIAH3Q8IW03 269 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 TSPAN32Q96QS1 320 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 CLEC2DQ9UHP7 191 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 PSG11Q9UQ72 335 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 WDR90Q96KV7 1748 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 EVPLQ92817 2033 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 COL11A2P13942 1736 aaPredicted RBP12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 ZNF705FA8MVS1 300 aaPredicted RBP12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 ZNF705DP0CH99 300 aaPredicted RBP12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 ZNF705BP0CI00 300 aaPredicted RBP12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 TNXAQ16473 311 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 DOLPP1Q86YN1 238 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 SHISA5Q8N114 240 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 SMIM19Q96E16 107 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 DUS3LQ96G46 650 aaKnown RBP12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 OR5M11Q96RB7 305 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 ACTR3CQ9C0K3 210 aaPredicted RBP12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 CD300AQ9UGN4 299 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 C20orf202A1L168 122 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 A1L4Q6 167 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 TMEM210A6NLX4 147 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 ARG1P05089 322 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 HNRNPFP52597 415 aaKnown RBP12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 PAFAH1B2P68402 229 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 FMODQ06828 376 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 OR2M3Q8NG83 312 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 MZB1Q8WU39 189 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 ADTRPQ96IZ2 230 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 OR8B4Q96RC9 309 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 GPR35Q9HC97 309 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 ING1Q9UK53 422 aaPredicted RBP12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 TCRBV16S1A1N1A0A5B0 115 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 OR7C2O60412 319 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 ADRA2AP08913 450 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 OR5H8P0DN80 308 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 RPS27P42677 84 aaKnown RBP12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 PMP22Q01453 160 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 OR52L2PQ8NGH6 319 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 SLC25A37Q9NYZ2 338 aa12.07□□□□□ -0.48
PDGFRB-201ENST00000261799 RER1O15258 196 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 SLC25A6P12236 298 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 C2orf76Q3KRA6 126 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 MRGPRGQ86SM5 289 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 ACP1P24666 158 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 OTPQ5XKR4 325 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 OR52N4Q8NGI2 321 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 LRFN3Q9BTN0 628 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 ZNF416Q9BWM5 594 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 RAB33BQ9H082 229 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 LY75O60449 1722 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 ZAR1LA6NP61 321 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 EPPINO95925 133 aa12.06□□□□□ -0.48
PDGFRB-201ENST00000261799 HIKESHIQ53FT3 197 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms