RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 CBX5P45973 191 aa17■□□□□ 0.31
SCARB1-201ENST00000261693 TAS2R46P59540 309 aa17■□□□□ 0.31
SCARB1-201ENST00000261693 IL15RAQ13261 267 aa17■□□□□ 0.31
SCARB1-201ENST00000261693 IAH1Q2TAA2 248 aaPredicted RBP17■□□□□ 0.31
SCARB1-201ENST00000261693 ETV3LQ6ZN32 361 aa17■□□□□ 0.31
SCARB1-201ENST00000261693 NECAB3Q96P71 396 aaPredicted RBP17■□□□□ 0.31
SCARB1-201ENST00000261693 HDHD3Q9BSH5 251 aaPredicted RBP17■□□□□ 0.31
SCARB1-201ENST00000261693 WIF1Q9Y5W5 379 aa17■□□□□ 0.31
SCARB1-201ENST00000261693 CD80P33681 288 aa17■□□□□ 0.31
SCARB1-201ENST00000261693 SPEM2Q0P670 501 aa17■□□□□ 0.31
SCARB1-201ENST00000261693 CLEC9AQ6UXN8 241 aa17■□□□□ 0.31
SCARB1-201ENST00000261693 C6orf201Q7Z4U5 140 aa17■□□□□ 0.31
SCARB1-201ENST00000261693 SSC4DQ8WTU2 575 aa17■□□□□ 0.31
SCARB1-201ENST00000261693 PIGTQ969N2 578 aa17■□□□□ 0.31
SCARB1-201ENST00000261693 PLA2G2EQ9NZK7 142 aa17■□□□□ 0.31
SCARB1-201ENST00000261693 MEX3AA1L020 520 aaKnown RBP16.99■□□□□ 0.31
SCARB1-201ENST00000261693 FCGR2AP12318 317 aa16.99■□□□□ 0.31
SCARB1-201ENST00000261693 ZNF708P17019 499 aa16.99■□□□□ 0.31
SCARB1-201ENST00000261693 CCL1P22362 96 aa16.99■□□□□ 0.31
SCARB1-201ENST00000261693 GABRR1P24046 479 aa16.99■□□□□ 0.31
SCARB1-201ENST00000261693 UBE2V2Q15819 145 aa16.99■□□□□ 0.31
SCARB1-201ENST00000261693 SLC25A45Q8N413 288 aa16.99■□□□□ 0.31
SCARB1-201ENST00000261693 FAM89BQ8N5H3 189 aa16.99■□□□□ 0.31
SCARB1-201ENST00000261693 OR6X1Q8NH79 312 aa16.99■□□□□ 0.31
SCARB1-201ENST00000261693 C14orf166Q9Y224 244 aaKnown RBP16.99■□□□□ 0.31
SCARB1-201ENST00000261693 PCDHGA1Q9Y5H4 931 aa16.99■□□□□ 0.31
SCARB1-201ENST00000261693 ZNF205O95201 554 aa16.99■□□□□ 0.31
SCARB1-201ENST00000261693 IFNA2P01563 188 aa16.99■□□□□ 0.31
SCARB1-201ENST00000261693 AKR1C3P42330 323 aa16.99■□□□□ 0.31
SCARB1-201ENST00000261693 CLDN17P56750 224 aa16.99■□□□□ 0.31
SCARB1-201ENST00000261693 NKAIN1Q4KMZ8 207 aa16.99■□□□□ 0.31
SCARB1-201ENST00000261693 LCN10Q6JVE6 187 aa16.99■□□□□ 0.31
SCARB1-201ENST00000261693 LRRC18Q8N456 261 aa16.99■□□□□ 0.31
SCARB1-201ENST00000261693 GLYATL2Q8WU03 294 aa16.99■□□□□ 0.31
SCARB1-201ENST00000261693 SAT2Q96F10 170 aaPredicted RBP16.99■□□□□ 0.31
SCARB1-201ENST00000261693 DNAJB11Q9UBS4 358 aa16.99■□□□□ 0.31
SCARB1-201ENST00000261693 MCTS1Q9ULC4 181 aaKnown RBP16.99■□□□□ 0.31
SCARB1-201ENST00000261693 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.98■□□□□ 0.31
SCARB1-201ENST00000261693 RAB30Q15771 203 aa16.98■□□□□ 0.31
SCARB1-201ENST00000261693 AVPI1Q5T686 147 aa16.98■□□□□ 0.31
SCARB1-201ENST00000261693 SEMA6DQ8NFY4 1073 aa16.98■□□□□ 0.31
SCARB1-201ENST00000261693 EMG1Q92979 244 aaKnown RBP16.98■□□□□ 0.31
SCARB1-201ENST00000261693 WDR77Q9BQA1 342 aaPredicted RBP16.98■□□□□ 0.31
SCARB1-201ENST00000261693 ZNF2Q9BSG1 426 aaPredicted RBP16.98■□□□□ 0.31
SCARB1-201ENST00000261693 TGIF2Q9GZN2 237 aa16.98■□□□□ 0.31
SCARB1-201ENST00000261693 ZNF160Q9HCG1 818 aa16.98■□□□□ 0.31
SCARB1-201ENST00000261693 BIN3Q9NQY0 253 aa16.98■□□□□ 0.31
SCARB1-201ENST00000261693 OR5H15A6NDH6 313 aa16.98■□□□□ 0.31
SCARB1-201ENST00000261693 DHRS7CA6NNS2 312 aa16.98■□□□□ 0.31
SCARB1-201ENST00000261693 ETV2O00321 342 aaPredicted RBP16.98■□□□□ 0.31
SCARB1-201ENST00000261693 SCGB1D2O95969 90 aa16.98■□□□□ 0.31
SCARB1-201ENST00000261693 GLB1P16278 677 aa16.98■□□□□ 0.31
SCARB1-201ENST00000261693 RPL12P30050 165 aaKnown RBP16.98■□□□□ 0.31
SCARB1-201ENST00000261693 RBMXP38159 391 aaKnown RBP16.98■□□□□ 0.31
SCARB1-201ENST00000261693 ECH1Q13011 328 aa16.98■□□□□ 0.31
SCARB1-201ENST00000261693 PRAMEF20Q5VT98 475 aa16.98■□□□□ 0.31
SCARB1-201ENST00000261693 RHBDD2Q6NTF9 364 aa16.98■□□□□ 0.31
SCARB1-201ENST00000261693 OXGR1Q96P68 337 aa16.98■□□□□ 0.31
SCARB1-201ENST00000261693 S100A13Q99584 98 aa16.98■□□□□ 0.31
SCARB1-201ENST00000261693 CA14Q9ULX7 337 aa16.98■□□□□ 0.31
SCARB1-201ENST00000261693 LSM5Q9Y4Y9 91 aaKnown RBP16.98■□□□□ 0.31
SCARB1-201ENST00000261693 FOXI3A8MTJ6 420 aaPredicted RBP16.97■□□□□ 0.31
SCARB1-201ENST00000261693 K7EPK0 472 aa16.97■□□□□ 0.31
SCARB1-201ENST00000261693 FAM71E2Q8N5Q1 922 aa16.97■□□□□ 0.31
SCARB1-201ENST00000261693 CNTNAP3Q9BZ76 1288 aa16.97■□□□□ 0.31
SCARB1-201ENST00000261693 MYOTQ9UBF9 498 aa16.97■□□□□ 0.31
SCARB1-201ENST00000261693 FBXL17Q9UF56 701 aa16.97■□□□□ 0.31
SCARB1-201ENST00000261693 MEMO1Q9Y316 297 aa16.97■□□□□ 0.31
SCARB1-201ENST00000261693 FRYLO94915 3013 aa16.97■□□□□ 0.31
SCARB1-201ENST00000261693 ADAMTS20P59510 1910 aa16.97■□□□□ 0.31
SCARB1-201ENST00000261693 CEP192Q8TEP8 1941 aa16.97■□□□□ 0.31
SCARB1-201ENST00000261693 FIGNL2A6NMB9 653 aa16.97■□□□□ 0.31
SCARB1-201ENST00000261693 GRB2P62993 217 aaKnown RBP16.97■□□□□ 0.31
SCARB1-201ENST00000261693 RHBDD1Q8TEB9 315 aa16.97■□□□□ 0.31
SCARB1-201ENST00000261693 SULT4A1Q9BR01 284 aa16.97■□□□□ 0.31
SCARB1-201ENST00000261693 COA4Q9NYJ1 87 aa16.97■□□□□ 0.31
SCARB1-201ENST00000261693 PIGLQ9Y2B2 252 aa16.97■□□□□ 0.31
SCARB1-201ENST00000261693 OR8U9P0C7N5 309 aa16.96■□□□□ 0.31
SCARB1-201ENST00000261693 FCGR2CP31995 323 aa16.96■□□□□ 0.31
SCARB1-201ENST00000261693 PEA15Q15121 130 aa16.96■□□□□ 0.31
SCARB1-201ENST00000261693 FAM189A2Q15884 450 aa16.96■□□□□ 0.31
SCARB1-201ENST00000261693 SLC25A53Q5H9E4 307 aa16.96■□□□□ 0.31
SCARB1-201ENST00000261693 FAM76BQ5HYJ3 339 aa16.96■□□□□ 0.31
SCARB1-201ENST00000261693 EIF5AL1Q6IS14 154 aaKnown RBP16.96■□□□□ 0.31
SCARB1-201ENST00000261693 Q6ZRG5 221 aa16.96■□□□□ 0.31
SCARB1-201ENST00000261693 CARFQ8N187 725 aa16.96■□□□□ 0.31
SCARB1-201ENST00000261693 OR2M3Q8NG83 312 aa16.96■□□□□ 0.31
SCARB1-201ENST00000261693 OR8U1Q8NH10 309 aa16.96■□□□□ 0.31
SCARB1-201ENST00000261693 SHDQ96IW2 340 aa16.96■□□□□ 0.31
SCARB1-201ENST00000261693 AKR1E2Q96JD6 320 aa16.96■□□□□ 0.31
SCARB1-201ENST00000261693 OR6C1Q96RD1 312 aa16.96■□□□□ 0.31
SCARB1-201ENST00000261693 C1orf123Q9NWV4 160 aa16.96■□□□□ 0.31
SCARB1-201ENST00000261693 FBXO9Q9UK97 447 aaPredicted RBP16.96■□□□□ 0.31
SCARB1-201ENST00000261693 IGHV3-15A0A0B4J1V0 119 aa16.96■□□□□ 0.3
SCARB1-201ENST00000261693 FCGR3AP08637 254 aa16.96■□□□□ 0.3
SCARB1-201ENST00000261693 DBHP09172 617 aa16.96■□□□□ 0.3
SCARB1-201ENST00000261693 PRF1P14222 555 aa16.96■□□□□ 0.3
SCARB1-201ENST00000261693 MSX1P28360 303 aa16.96■□□□□ 0.3
SCARB1-201ENST00000261693 HIST3H3Q16695 136 aa16.96■□□□□ 0.3
SCARB1-201ENST00000261693 PHYHD1Q5SRE7 291 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms