RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 LRRC18Q8N456 261 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 PP6455Q8WZ26 134 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 TMEM54Q969K7 222 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 ARL11Q969Q4 196 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 ZNF385AQ96PM9 386 aaKnown RBP13.36□□□□□ -0.27
DDX56-201ENST00000258772 TM2D1Q9BX74 207 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 UBE2ZQ9H832 354 aaPredicted RBP13.36□□□□□ -0.27
DDX56-201ENST00000258772 SDK2Q58EX2 2172 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 FIGNL2A6NMB9 653 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 EPHA8P29322 1005 aaPredicted RBP13.36□□□□□ -0.27
DDX56-201ENST00000258772 PCOLCEQ15113 449 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 CHRFAM7AQ494W8 412 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 DRAM2Q6UX65 266 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 PUSL1Q8N0Z8 303 aaKnown RBP13.36□□□□□ -0.27
DDX56-201ENST00000258772 SVBPQ8N300 66 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 POC1AQ8NBT0 407 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 OR51F2Q8NH61 342 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 HAS2Q92819 552 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 NABP1Q96AH0 204 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 S100A13Q99584 98 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 CHST5Q9GZS9 411 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 PIGLQ9Y2B2 252 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 ARID1AO14497 2285 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 WDR87Q6ZQQ6 2873 aa13.36□□□□□ -0.27
DDX56-201ENST00000258772 A0A087WZY1 265 aa13.35□□□□□ -0.27
DDX56-201ENST00000258772 NUDT19A8MXV4 375 aa13.35□□□□□ -0.27
DDX56-201ENST00000258772 CSTBP04080 98 aaKnown RBP13.35□□□□□ -0.27
DDX56-201ENST00000258772 CELA2AP08217 269 aa13.35□□□□□ -0.27
DDX56-201ENST00000258772 OTX1P32242 354 aaPredicted RBP13.35□□□□□ -0.27
DDX56-201ENST00000258772 ZNF133P52736 654 aaPredicted RBP13.35□□□□□ -0.27
DDX56-201ENST00000258772 SRSF3P84103 164 aaKnown RBP13.35□□□□□ -0.27
DDX56-201ENST00000258772 SURF2Q15527 256 aaPredicted RBP13.35□□□□□ -0.27
DDX56-201ENST00000258772 GUCA2BQ16661 112 aa13.35□□□□□ -0.27
DDX56-201ENST00000258772 PLEKHN1Q494U1 663 aaPredicted RBP13.35□□□□□ -0.27
DDX56-201ENST00000258772 FOXL2NBQ6ZUU3 175 aa13.35□□□□□ -0.27
DDX56-201ENST00000258772 NECAB3Q96P71 396 aaPredicted RBP13.35□□□□□ -0.27
DDX56-201ENST00000258772 OCIAD1Q9NX40 245 aa13.35□□□□□ -0.27
DDX56-201ENST00000258772 ZNF629Q9UEG4 869 aaPredicted RBP13.35□□□□□ -0.27
DDX56-201ENST00000258772 IGHV3-15A0A0B4J1V0 119 aa13.35□□□□□ -0.27
DDX56-201ENST00000258772 SIGLEC6O43699 453 aa13.35□□□□□ -0.27
DDX56-201ENST00000258772 HOXB5P09067 269 aa13.35□□□□□ -0.27
DDX56-201ENST00000258772 CPT2P23786 658 aa13.35□□□□□ -0.27
DDX56-201ENST00000258772 IL32P24001 234 aa13.35□□□□□ -0.27
DDX56-201ENST00000258772 HIST1H3AP68431 136 aa13.35□□□□□ -0.27
DDX56-201ENST00000258772 ARL6IP1Q15041 203 aa13.35□□□□□ -0.27
DDX56-201ENST00000258772 HIST2H3PS2Q5TEC6 136 aa13.35□□□□□ -0.27
DDX56-201ENST00000258772 Q6ZSR3 168 aa13.35□□□□□ -0.27
DDX56-201ENST00000258772 HIST2H3AQ71DI3 136 aa13.35□□□□□ -0.27
DDX56-201ENST00000258772 FAM219AQ8IW50 185 aa13.35□□□□□ -0.27
DDX56-201ENST00000258772 OR4A4PQ8NGN8 299 aa13.35□□□□□ -0.27
DDX56-201ENST00000258772 SHDQ96IW2 340 aa13.35□□□□□ -0.27
DDX56-201ENST00000258772 RBM24Q9BX46 236 aaKnown RBP13.35□□□□□ -0.27
DDX56-201ENST00000258772 ELL3Q9HB65 397 aaPredicted RBP13.35□□□□□ -0.27
DDX56-201ENST00000258772 GSKIPQ9P0R6 139 aa13.35□□□□□ -0.27
DDX56-201ENST00000258772 DNAJB11Q9UBS4 358 aa13.35□□□□□ -0.27
DDX56-201ENST00000258772 IGKV1D-8A0A087WSZ0 117 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 K7ESF4 209 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 DHHO43323 396 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 CA11O75493 328 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 KNG1P01042 644 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 CD63P08962 238 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 PET100P0DJ07 73 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 MST1LQ2TV78 715 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 C10orf91Q5T1B1 145 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 LDLRAD3Q86YD5 345 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 PIGTQ969N2 578 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 GNRHR2Q96P88 292 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 UCN2Q96RP3 112 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 PIGQQ9BRB3 760 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 SLC5A7Q9GZV3 580 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 OR2S2Q9NQN1 319 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 MMP26Q9NRE1 261 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 ZNF701Q9NV72 531 aaPredicted RBP13.34□□□□□ -0.27
DDX56-201ENST00000258772 PMS2P1A4D2B8 440 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 ZNF705EA8MWA4 302 aaPredicted RBP13.34□□□□□ -0.27
DDX56-201ENST00000258772 NPIPA2E9PIF3 369 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 NPIPA3F8WFD2 350 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 M0R135 149 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 EIF1BO60739 113 aaKnown RBP13.34□□□□□ -0.27
DDX56-201ENST00000258772 VAMP5O95183 116 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 DBHP09172 617 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 CXCL12P48061 93 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 PPA1Q15181 289 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 RSPO4Q2I0M5 234 aaPredicted RBP13.34□□□□□ -0.27
DDX56-201ENST00000258772 RTL6Q6ICC9 239 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 C6orf201Q7Z4U5 140 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 TMEM200AQ86VY9 491 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 TMEM123Q8N131 208 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 WNT2BQ93097 391 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 ZNF799Q96GE5 643 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 CNTNAP3BQ96NU0 1288 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 WNT16Q9UBV4 365 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 MCTS1Q9ULC4 181 aaKnown RBP13.34□□□□□ -0.27
DDX56-201ENST00000258772 C14orf166Q9Y224 244 aaKnown RBP13.34□□□□□ -0.27
DDX56-201ENST00000258772 PCDHGA1Q9Y5H4 931 aa13.34□□□□□ -0.27
DDX56-201ENST00000258772 LOC102723996A0A087X1L8 192 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 F8W036 122 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 GDF9O60383 454 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 ZIC3O60481 467 aa13.33□□□□□ -0.28
DDX56-201ENST00000258772 MTRF1O75570 445 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms