RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 PIKFYVEQ9Y2I7 2098 aa10.53□□□□□ -0.72
CCNA1-201ENST00000255465 TGIF2-C20orf24A0A0A6YYL0 155 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 H3BQ15 152 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 TNFRSF10CO14798 259 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 PRSS3P35030 304 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 GRK6P43250 576 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 BLKP51451 505 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 TMEM183BQ1AE95 376 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 C18orf21Q32NC0 220 aaPredicted RBP10.52□□□□□ -0.73
CCNA1-201ENST00000255465 SMIM21Q3B7S5 101 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 MIDNQ504T8 468 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 ZNF311Q5JNZ3 666 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 NIPAL3Q6P499 406 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 ZNF836Q6ZNA1 936 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 TEX43Q6ZNM6 134 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 MED25Q71SY5 747 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 C17orf64Q86WR6 236 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 KDM8Q8N371 416 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 AMER3Q8N944 861 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 GPR32P1Q8NGA4 272 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 OR10G4Q8NGN3 311 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 OR1L6Q8NGR2 347 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 ADAMTS18Q8TE60 1221 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 RHBDD1Q8TEB9 315 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 TMEM234Q8WY98 164 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 RGP1Q92546 391 aaPredicted RBP10.52□□□□□ -0.73
CCNA1-201ENST00000255465 COX14Q96I36 57 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 SEC22AQ96IW7 307 aa10.52□□□□□ -0.73
CCNA1-201ENST00000255465 RBM7Q9Y580 266 aaKnown RBP10.52□□□□□ -0.73
CCNA1-201ENST00000255465 A0A1B0GV72 72 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 A0A1W2PR48 441 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 PRSS38A1L453 326 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 NPIPA7E9PJI5 369 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 CLDN34H7C241 214 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 TNFP01375 233 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 CEACAM5P06731 702 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 CHRM2P08172 466 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 PGA4P0DJD7 388 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 PGA5P0DJD9 388 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 GIMD1P0DJR0 217 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 NPIPA8P0DM63 369 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 CT45A8P0DMV1 189 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 CT45A9P0DMV2 189 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 ACSM2AQ08AH3 577 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 C1orf61Q13536 156 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 CDK5R1Q15078 307 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 EBPQ15125 230 aaKnown RBP10.51□□□□□ -0.73
CCNA1-201ENST00000255465 CPSF6Q16630 551 aaKnown RBP eCLIP10.51□□□□□ -0.73
CCNA1-201ENST00000255465 DUSP5Q16690 384 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 CT45A2Q5DJT8 189 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 RPS26P11Q5JNZ5 115 aaPredicted RBP10.51□□□□□ -0.73
CCNA1-201ENST00000255465 PRAMEF20Q5VT98 475 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 ACSM2BQ68CK6 577 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 RPUSD3Q6P087 351 aaKnown RBP10.51□□□□□ -0.73
CCNA1-201ENST00000255465 TMEM220Q6QAJ8 160 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 SUN3Q8TAQ9 357 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 BAHD1Q8TBE0 780 aaPredicted RBP10.51□□□□□ -0.73
CCNA1-201ENST00000255465 LMX1AQ8TE12 382 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 GPX8Q8TED1 209 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 MCHR2Q969V1 340 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 SEH1LQ96EE3 360 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 LRRC61Q9BV99 259 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 PLA2G12AQ9BZM1 189 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 VPS29Q9UBQ0 182 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 FOXD3Q9UJU5 478 aaPredicted RBP10.51□□□□□ -0.73
CCNA1-201ENST00000255465 SLC17A4Q9Y2C5 497 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 ENTPD2Q9Y5L3 495 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 COX11Q9Y6N1 276 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 CEACAM1P13688 526 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 TMEM33P57088 247 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 RHOGP84095 191 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 PRSS8Q16651 343 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 BSXQ3C1V8 233 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 ACOT6Q3I5F7 207 aaPredicted RBP10.51□□□□□ -0.73
CCNA1-201ENST00000255465 C1orf189Q5VU69 101 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 FDX2Q6P4F2 183 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 FAM151BQ6UXP7 276 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 PNPLA1Q8N8W4 532 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 SLC38A9Q8NBW4 561 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 MFSD8Q8NHS3 518 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 TSLPQ969D9 159 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 GLYATL1Q969I3 302 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 TOMM40LQ969M1 308 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 DERL3Q96Q80 235 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 RAB18Q9NP72 206 aa10.51□□□□□ -0.73
CCNA1-201ENST00000255465 MRPS33Q9Y291 106 aaKnown RBP10.51□□□□□ -0.73
CCNA1-201ENST00000255465 ASXL3Q9C0F0 2248 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 RP1P56715 2156 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 SERPINE3A8MV23 424 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 CTSVO60911 334 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 SLC25A14O95258 325 aaPredicted RBP10.5□□□□□ -0.73
CCNA1-201ENST00000255465 SCGB1D1O95968 90 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 CTSEP14091 401 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 MSR1P21757 451 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 BTG2P78543 158 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 HTD2P86397 168 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 CRMP1Q14194 572 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 TCEA2Q15560 299 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 FBLN7Q53RD9 439 aa10.5□□□□□ -0.73
CCNA1-201ENST00000255465 AADACL3Q5VUY0 350 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms