RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 TMEM225BP0DP42 221 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 CD46P15529 392 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 NAT1P18440 290 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 MEOX1P50221 254 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 TMEM50BP56557 158 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 TAS2R46P59540 309 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 STK11Q15831 433 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 VAX1Q5SQQ9 334 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 TSPO2Q5TGU0 170 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 C17orf107Q6ZR85 190 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 MCEMP1Q8IX19 187 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 SKA3Q8IX90 412 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 TMEM251Q8N6I4 163 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 OR10K1Q8NGX5 313 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 SCGB3A2Q96PL1 93 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 PHB2Q99623 299 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 OCSTAMPQ9BR26 566 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 PDCD10Q9BUL8 212 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 TM2D1Q9BX74 207 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 METTL9Q9H1A3 318 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 IRF2BPLQ9H1B7 796 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 WNT5BQ9H1J7 359 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 ATPIF1Q9UII2 106 aa13.2□□□□□ -0.3
DDX49-201ENST00000247003 FAM230AA0A1W2PPH8 454 aa13.19□□□□□ -0.3
DDX49-201ENST00000247003 ARPC5O15511 151 aa13.19□□□□□ -0.3
DDX49-201ENST00000247003 NME2P1O60361 137 aa13.19□□□□□ -0.3
DDX49-201ENST00000247003 IGHV3-9P01782 118 aa13.19□□□□□ -0.3
DDX49-201ENST00000247003 NME2P22392 152 aa13.19□□□□□ -0.3
DDX49-201ENST00000247003 OR3A3P47888 321 aa13.19□□□□□ -0.3
DDX49-201ENST00000247003 OR3A2P47893 321 aa13.19□□□□□ -0.3
DDX49-201ENST00000247003 RBP2P50120 134 aa13.19□□□□□ -0.3
DDX49-201ENST00000247003 NUBP1P53384 320 aa13.19□□□□□ -0.3
DDX49-201ENST00000247003 IL13RA1P78552 427 aa13.19□□□□□ -0.3
DDX49-201ENST00000247003 EXOSC2Q13868 293 aaKnown RBP13.19□□□□□ -0.3
DDX49-201ENST00000247003 PPA1Q15181 289 aa13.19□□□□□ -0.3
DDX49-201ENST00000247003 RSU1Q15404 277 aa13.19□□□□□ -0.3
DDX49-201ENST00000247003 C2orf68Q2NKX9 166 aa13.19□□□□□ -0.3
DDX49-201ENST00000247003 KRTAP27-1Q3LI81 207 aa13.19□□□□□ -0.3
DDX49-201ENST00000247003 DCAF12L2Q5VW00 463 aa13.19□□□□□ -0.3
DDX49-201ENST00000247003 OR5M8Q8NGP6 311 aa13.19□□□□□ -0.3
DDX49-201ENST00000247003 TECTBQ96PL2 329 aa13.19□□□□□ -0.3
DDX49-201ENST00000247003 CALHM2Q9HA72 323 aa13.19□□□□□ -0.3
DDX49-201ENST00000247003 COMMD9Q9P000 198 aa13.19□□□□□ -0.3
DDX49-201ENST00000247003 KCNN3Q9UGI6 736 aa13.19□□□□□ -0.3
DDX49-201ENST00000247003 CFAP54Q96N23 3096 aa13.19□□□□□ -0.3
DDX49-201ENST00000247003 RP2O75695 350 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 LIPCP11150 499 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 VAMP1P23763 118 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 ACKR3P25106 362 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 CD82P27701 267 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 HGFACQ04756 655 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 MICBQ29980 383 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 PLXDC2Q6UX71 529 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 C1QL2Q7Z5L3 287 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 CITED4Q96RK1 184 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 PECRQ9BY49 303 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 SLC7A11Q9UPY5 501 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 MCRIP1C9JLW8 97 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 GALR2O43603 387 aaPredicted RBP13.18□□□□□ -0.3
DDX49-201ENST00000247003 CA11O75493 328 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 RAD51DO75771 328 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 MPC2O95563 127 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 NRASP01111 189 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 AKR1C4P17516 323 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 CXCL2P19875 107 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 GABRR1P24046 479 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 AGTR1P30556 359 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 S100A11P31949 105 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 RRADP55042 308 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 PPIAP62937 165 aaKnown RBP13.18□□□□□ -0.3
DDX49-201ENST00000247003 RNPS1Q15287 305 aaKnown RBP13.18□□□□□ -0.3
DDX49-201ENST00000247003 PABPC1L2AQ5JQF8 200 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 RTN4RL2Q86UN3 420 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 TUSC5Q8IXB3 177 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 ZNF100Q8IYN0 542 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 CSNK2A3Q8NEV1 391 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 TERB2Q8NHR7 220 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 SLC7A10Q9NS82 523 aa13.18□□□□□ -0.3
DDX49-201ENST00000247003 C9orf170A2RU37 121 aa13.17□□□□□ -0.3
DDX49-201ENST00000247003 OR2AT4A6NND4 320 aa13.17□□□□□ -0.3
DDX49-201ENST00000247003 ZNF724A8MTY0 619 aa13.17□□□□□ -0.3
DDX49-201ENST00000247003 PRR33A8MZF0 331 aa13.17□□□□□ -0.3
DDX49-201ENST00000247003 HTR3BO95264 441 aa13.17□□□□□ -0.3
DDX49-201ENST00000247003 ACTL6AO96019 429 aa13.17□□□□□ -0.3
DDX49-201ENST00000247003 IL2RAP01589 272 aa13.17□□□□□ -0.3
DDX49-201ENST00000247003 ZBTB25P24278 435 aa13.17□□□□□ -0.3
DDX49-201ENST00000247003 SORDQ00796 357 aa13.17□□□□□ -0.3
DDX49-201ENST00000247003 PPP1R1AQ13522 171 aa13.17□□□□□ -0.3
DDX49-201ENST00000247003 CRIP3Q6Q6R5 217 aa13.17□□□□□ -0.3
DDX49-201ENST00000247003 HOGA1Q86XE5 327 aa13.17□□□□□ -0.3
DDX49-201ENST00000247003 DTX1Q86Y01 620 aa13.17□□□□□ -0.3
DDX49-201ENST00000247003 MDS2Q8NDY4 140 aa13.17□□□□□ -0.3
DDX49-201ENST00000247003 FBXW5Q969U6 566 aa13.17□□□□□ -0.3
DDX49-201ENST00000247003 APH1AQ96BI3 265 aa13.17□□□□□ -0.3
DDX49-201ENST00000247003 ST6GALNAC5Q9BVH7 336 aa13.17□□□□□ -0.3
DDX49-201ENST00000247003 PRDM14Q9GZV8 571 aa13.17□□□□□ -0.3
DDX49-201ENST00000247003 RNF122Q9H9V4 155 aa13.17□□□□□ -0.3
DDX49-201ENST00000247003 ZNF701Q9NV72 531 aaPredicted RBP13.17□□□□□ -0.3
DDX49-201ENST00000247003 PLEKHJ1Q9NW61 149 aa13.17□□□□□ -0.3
DDX49-201ENST00000247003 ZNF816-ZNF321PA0A0X1KG74 233 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms