RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 DOCK2Q92608 1830 aa11.98□□□□□ -0.49
NEK4-201ENST00000233027 CTSVO60911 334 aa11.98□□□□□ -0.49
NEK4-201ENST00000233027 IGHA2P01877 340 aa11.98□□□□□ -0.49
NEK4-201ENST00000233027 C1QAP02745 245 aa11.98□□□□□ -0.49
NEK4-201ENST00000233027 ADH4P08319 380 aa11.98□□□□□ -0.49
NEK4-201ENST00000233027 RNF212Q495C1 297 aa11.98□□□□□ -0.49
NEK4-201ENST00000233027 THSD4Q6ZMP0 1018 aa11.98□□□□□ -0.49
NEK4-201ENST00000233027 OR2V1Q8NHB1 315 aa11.98□□□□□ -0.49
NEK4-201ENST00000233027 CXorf58Q96LI9 332 aa11.98□□□□□ -0.49
NEK4-201ENST00000233027 PRRX2Q99811 253 aa11.98□□□□□ -0.49
NEK4-201ENST00000233027 TOLLIPQ9H0E2 274 aa11.98□□□□□ -0.49
NEK4-201ENST00000233027 FZR1Q9UM11 496 aa11.98□□□□□ -0.49
NEK4-201ENST00000233027 TRAV20A0A0B4J274 112 aa11.98□□□□□ -0.49
NEK4-201ENST00000233027 CDKN2AP42771 156 aaKnown RBP11.98□□□□□ -0.49
NEK4-201ENST00000233027 RPS23P62266 143 aaKnown RBP11.98□□□□□ -0.49
NEK4-201ENST00000233027 RAB32Q13637 225 aa11.98□□□□□ -0.49
NEK4-201ENST00000233027 Q6ZS52 159 aa11.98□□□□□ -0.49
NEK4-201ENST00000233027 GVQW1Q8N7I0 195 aa11.98□□□□□ -0.49
NEK4-201ENST00000233027 OR1F12Q8NHA8 337 aa11.98□□□□□ -0.49
NEK4-201ENST00000233027 ACY3Q96HD9 319 aa11.98□□□□□ -0.49
NEK4-201ENST00000233027 CIB3Q96Q77 187 aaPredicted RBP11.98□□□□□ -0.49
NEK4-201ENST00000233027 FOXB1Q99853 325 aa11.98□□□□□ -0.49
NEK4-201ENST00000233027 A0A1W2PR80 420 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 ERVFC1-1P60608 527 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 PRDX4Q13162 271 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 SPINK9Q5DT21 86 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 C6orf201Q7Z4U5 140 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 VPS25Q9BRG1 176 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 NXF2Q9GZY0 626 aaKnown RBP11.97□□□□□ -0.49
NEK4-201ENST00000233027 SDK1Q7Z5N4 2213 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 C2CD4DB7Z1M9 353 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 CDC42EP2O14613 210 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 TOX4O94842 621 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 SLC25A1P53007 311 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 BPIFB3P59826 476 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 SNRPEP62304 92 aaKnown RBP11.97□□□□□ -0.49
NEK4-201ENST00000233027 KISS1Q15726 138 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 UQCC3Q6UW78 93 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 ZDHHC22Q8N966 263 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 ANGPTL6Q8NI99 470 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 ARAP2Q8WZ64 1704 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 SLC22A20A6NK97 555 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 DSCR4P56555 118 aaPredicted RBP11.97□□□□□ -0.49
NEK4-201ENST00000233027 MOGAT2Q3SYC2 334 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 OR1J1Q8NGS3 322 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 TRAPPC1Q9Y5R8 145 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 DBX1A6NMT0 343 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 DEFB108AA8MXU0 73 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 SFT2D2O95562 160 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 KRASP01116 189 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 HIST1H1DP16402 221 aaKnown RBP11.97□□□□□ -0.49
NEK4-201ENST00000233027 PMCHP20382 165 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 BMP5P22003 454 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 OR5I1Q13606 314 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 WIPI1Q5MNZ9 446 aaPredicted RBP11.97□□□□□ -0.49
NEK4-201ENST00000233027 SEZ6L2Q6UXD5 910 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 SPACA9Q96E40 222 aaPredicted RBP11.97□□□□□ -0.49
NEK4-201ENST00000233027 PHF7Q9BWX1 381 aaPredicted RBP11.97□□□□□ -0.49
NEK4-201ENST00000233027 IGLV3-16A0A075B6K0 115 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 VAMP3Q15836 100 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 PLA1AQ53H76 456 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 MTFP1Q9UDX5 166 aa11.97□□□□□ -0.49
NEK4-201ENST00000233027 SPINK4O60575 86 aa11.96□□□□□ -0.49
NEK4-201ENST00000233027 CBR3O75828 277 aa11.96□□□□□ -0.49
NEK4-201ENST00000233027 NKX2-2O95096 273 aa11.96□□□□□ -0.49
NEK4-201ENST00000233027 SULT1A3P0DMM9 295 aa11.96□□□□□ -0.49
NEK4-201ENST00000233027 SULT1A4P0DMN0 295 aa11.96□□□□□ -0.49
NEK4-201ENST00000233027 ZBTB25P24278 435 aa11.96□□□□□ -0.49
NEK4-201ENST00000233027 TOMM34Q15785 309 aaPredicted RBP11.96□□□□□ -0.49
NEK4-201ENST00000233027 TMEM215Q68D42 235 aa11.96□□□□□ -0.49
NEK4-201ENST00000233027 SIGIRRQ6IA17 410 aa11.96□□□□□ -0.49
NEK4-201ENST00000233027 ARRDC1Q8N5I2 433 aa11.96□□□□□ -0.49
NEK4-201ENST00000233027 CMTM3Q96MX0 182 aa11.96□□□□□ -0.49
NEK4-201ENST00000233027 RAB5AP20339 215 aa11.96□□□□□ -0.49
NEK4-201ENST00000233027 PRSS12P56730 875 aa11.96□□□□□ -0.49
NEK4-201ENST00000233027 B3GNTL1Q67FW5 361 aaPredicted RBP11.96□□□□□ -0.49
NEK4-201ENST00000233027 ZNF574Q6ZN55 896 aaPredicted RBP11.96□□□□□ -0.49
NEK4-201ENST00000233027 ABHD1Q96SE0 405 aa11.96□□□□□ -0.49
NEK4-201ENST00000233027 PLA2G2FQ9BZM2 168 aa11.96□□□□□ -0.49
NEK4-201ENST00000233027 SPTY2D1-AS1A0A0U1RR47 76 aa11.96□□□□□ -0.5
NEK4-201ENST00000233027 TNFSF15O95150 251 aa11.96□□□□□ -0.5
NEK4-201ENST00000233027 IL2RAP01589 272 aa11.96□□□□□ -0.5
NEK4-201ENST00000233027 CXCL10P02778 98 aa11.96□□□□□ -0.5
NEK4-201ENST00000233027 DEFB109BQ30KR1 87 aa11.96□□□□□ -0.5
NEK4-201ENST00000233027 KHDC1LQ5JSQ8 128 aa11.96□□□□□ -0.5
NEK4-201ENST00000233027 C16orf47Q6ZP98 133 aaPredicted RBP11.96□□□□□ -0.5
NEK4-201ENST00000233027 OR10D4PQ8NGN7 298 aa11.96□□□□□ -0.5
NEK4-201ENST00000233027 TMPRSS5Q9H3S3 457 aa11.96□□□□□ -0.5
NEK4-201ENST00000233027 CNTD2Q9H8S5 307 aa11.96□□□□□ -0.5
NEK4-201ENST00000233027 CRYAAP02489 173 aa11.96□□□□□ -0.5
NEK4-201ENST00000233027 CT62P0C5K7 136 aa11.96□□□□□ -0.5
NEK4-201ENST00000233027 PPP1CBP62140 327 aa11.96□□□□□ -0.5
NEK4-201ENST00000233027 SRSF5Q13243 272 aaKnown RBP11.96□□□□□ -0.5
NEK4-201ENST00000233027 ZNF683Q8IZ20 524 aa11.96□□□□□ -0.5
NEK4-201ENST00000233027 C4orf45Q96LM5 186 aa11.96□□□□□ -0.5
NEK4-201ENST00000233027 MMP24Q9Y5R2 645 aa11.96□□□□□ -0.5
NEK4-201ENST00000233027 SPRY3O43610 288 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 CDC14BO60729 498 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 EPPINO95925 133 aa11.95□□□□□ -0.5
NEK4-201ENST00000233027 FFAR4Q5NUL3 377 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms