RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 TNFSF18Q9UNG2 199 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 PCNX3Q9H6A9 2034 aa13.18□□□□□ -0.3
UBE2D4-201ENST00000222402 NPIPB13A6NJU9 1138 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 SERPINE3A8MV23 424 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 NPIPB4C9JG80 1138 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 SLC33A1O00400 549 aaPredicted RBP13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 HSPB6O14558 160 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 GNRHRP30968 328 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 CYB561P49447 251 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 CEACAM16Q2WEN9 425 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 MRPL21Q7Z2W9 205 aaKnown RBP13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 BIVMQ86UB2 503 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 MAFAQ8NHW3 353 aaPredicted RBP13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 SGCZQ96LD1 299 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 PARP12Q9H0J9 701 aaKnown RBP13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 PARPBPQ9NWS1 579 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 ZNF814B7Z6K7 855 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 YKT6O15498 198 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 EFSO43281 561 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 DIRAS3O95661 229 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 FPR2P25090 351 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 LSM6P62312 80 aaKnown RBP13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 GNMTQ14749 295 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 FAM166AQ6J272 317 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 ZNF100Q8IYN0 542 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 SAV1Q9H4B6 383 aaPredicted RBP13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 SMOC1Q9H4F8 434 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 ZNF286AQ9HBT8 521 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 NOSIPQ9Y314 301 aaKnown RBP13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 SFT2D2O95562 160 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 NRASP01111 189 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 PPA1Q15181 289 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 PLXDC2Q6UX71 529 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 HSD17B13Q7Z5P4 300 aaPredicted RBP13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 SVBPQ8N300 66 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 OR1S2Q8NGQ3 325 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 LDAHQ9H6V9 325 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 CALHM2Q9HA72 323 aa13.17□□□□□ -0.3
UBE2D4-201ENST00000222402 M0R036 132 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 TOR1AO14656 332 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 ZNF205O95201 554 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 GSK3AP49840 483 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 RAB32Q13637 225 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 ASPHD2Q6ICH7 369 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 ALKBH2Q6NS38 261 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 FAHD2BQ6P2I3 314 aaPredicted RBP13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 OR10S1Q8NGN2 331 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 FBXW5Q969U6 566 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 FAHD2AQ96GK7 314 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 C2orf50Q96LR7 162 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 FAAP24Q9BTP7 215 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 ATP6V1G2-DDX39BF2Z307 99 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 CAV2P51636 162 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 RAC1P63000 192 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 WDSUB1Q8N9V3 476 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 OR5L1Q8NGL2 311 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 ZNF700Q9H0M5 742 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 IGLV3-12A0A075B6K2 115 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 BET1O15155 118 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 ZNF32P17041 273 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 SP6Q3SY56 376 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 SAP25Q8TEE9 199 aa13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 EIF5A2Q9GZV4 153 aaKnown RBP13.16□□□□□ -0.3
UBE2D4-201ENST00000222402 SVILO95425 2214 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 MFSD2BA6NFX1 497 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 TMEM14DPA8MWL7 114 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 PAQR4Q8N4S7 273 aaPredicted RBP13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 OR51F2Q8NH61 342 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 MARVELD3Q96A59 401 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 PECRQ9BY49 303 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 NECAP2Q9NVZ3 263 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 BOKQ9UMX3 212 aaPredicted RBP13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 A0A0J9YW62 118 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 A0A1B0GTI1 187 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 TSPAN15O95858 294 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 LINC00696Q6ZRV3 163 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 Q7L0L9 218 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 BMPERQ8N8U9 685 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 BPIFCQ8NFQ6 507 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 OR5AP2Q8NGF4 316 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 OR2Y1Q8NGV0 311 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 MRPL13Q9BYD1 178 aaKnown RBP13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 NKX6-2Q9C056 277 aaPredicted RBP13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 TAF9BQ9HBM6 251 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 A0A096LPE4 126 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 A0A1W2PPZ6 126 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 H3BMH7 237 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 HSPA12AO43301 675 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 LIFP15018 202 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 CAMLGP49069 296 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 DHODHQ02127 395 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 LY6G6FQ5SQ64 297 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 TMEM88Q6PEY1 159 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 SLC22A25Q6T423 547 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 TMEM200AQ86VY9 491 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 FBXL14Q8N1E6 418 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 BHLHE23Q8NDY6 225 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 OR1F12Q8NHA8 337 aa13.15□□□□□ -0.3
UBE2D4-201ENST00000222402 ZNF845Q96IR2 970 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms