RNA–Protein interactions for RNA: ENST00000222275.2

UPK1A-201, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1A, Length 1,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-201ENST00000222275 MAPK3P27361 379 aaPredicted RBP11.54□□□□□ -0.56
UPK1A-201ENST00000222275 MAGEB1P43366 347 aa11.54□□□□□ -0.56
UPK1A-201ENST00000222275 GATA4P43694 442 aa11.54□□□□□ -0.56
UPK1A-201ENST00000222275 PDLIM4P50479 330 aa11.54□□□□□ -0.56
UPK1A-201ENST00000222275 PRSS12P56730 875 aa11.54□□□□□ -0.56
UPK1A-201ENST00000222275 EMX1Q04741 257 aaPredicted RBP11.54□□□□□ -0.56
UPK1A-201ENST00000222275 CEACAM21Q3KPI0 293 aa11.54□□□□□ -0.56
UPK1A-201ENST00000222275 TMEM42Q69YG0 159 aa11.54□□□□□ -0.56
UPK1A-201ENST00000222275 RDH10Q8IZV5 341 aa11.54□□□□□ -0.56
UPK1A-201ENST00000222275 SPARTQ8N0X7 666 aa11.54□□□□□ -0.56
UPK1A-201ENST00000222275 OR5A2Q8NGI9 324 aa11.54□□□□□ -0.56
UPK1A-201ENST00000222275 OR5D14Q8NGL3 314 aa11.54□□□□□ -0.56
UPK1A-201ENST00000222275 OR13C3Q8NGS6 347 aa11.54□□□□□ -0.56
UPK1A-201ENST00000222275 TSEN15Q8WW01 171 aaKnown RBP11.54□□□□□ -0.56
UPK1A-201ENST00000222275 SGCDQ92629 289 aa11.54□□□□□ -0.56
UPK1A-201ENST00000222275 GHSRQ92847 366 aa11.54□□□□□ -0.56
UPK1A-201ENST00000222275 HPS1Q92902 700 aa11.54□□□□□ -0.56
UPK1A-201ENST00000222275 MEGF10Q96KG7 1140 aa11.54□□□□□ -0.56
UPK1A-201ENST00000222275 OR2V2Q96R30 315 aa11.54□□□□□ -0.56
UPK1A-201ENST00000222275 MGLLQ99685 303 aa11.54□□□□□ -0.56
UPK1A-201ENST00000222275 PDCD1LG2Q9BQ51 273 aa11.54□□□□□ -0.56
UPK1A-201ENST00000222275 SLC7A11Q9UPY5 501 aa11.54□□□□□ -0.56
UPK1A-201ENST00000222275 ANK2Q01484 3957 aa11.54□□□□□ -0.56
UPK1A-201ENST00000222275 IGHV1-69-2A0A0G2JMI3 117 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 LRRC30A6NM36 301 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 ZNF850A8MQ14 1090 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 LILRA1O75019 489 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 PTBP3O95758 552 aaKnown RBP11.53□□□□□ -0.56
UPK1A-201ENST00000222275 LALBAP00709 142 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 HPXP02790 462 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 HLA-DPB1P04440 258 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 OCM2P0CE71 109 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 OCMP0CE72 109 aaPredicted RBP11.53□□□□□ -0.56
UPK1A-201ENST00000222275 HSMCR30P0CW71 290 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 IRF2P14316 349 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 NR4A2P43354 598 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 TMEM33P57088 247 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 TPBGQ13641 420 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 CNN3Q15417 329 aaKnown RBP11.53□□□□□ -0.56
UPK1A-201ENST00000222275 XAF1Q6GPH4 301 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 MOB3CQ70IA8 216 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 UTS2BQ765I0 119 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 PEG10Q86TG7 708 aaKnown RBP11.53□□□□□ -0.56
UPK1A-201ENST00000222275 SERPINA12Q8IW75 414 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 C1orf87Q8N0U7 546 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 OR10AD1Q8NGE0 317 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 OR11L1Q8NGX0 322 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 OR5P3Q8WZ94 311 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 ITPKCQ96DU7 683 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 RNF170Q96K19 258 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 OR5M11Q96RB7 305 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 CHST5Q9GZS9 411 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 ZNF696Q9H7X3 374 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 CHODLQ9H9P2 273 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 FN3KRPQ9HA64 309 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 PPP1R3CQ9UQK1 317 aa11.53□□□□□ -0.56
UPK1A-201ENST00000222275 LRP5LA4QPB2 252 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 F5H5P2 479 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 H0YL77 283 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 ALX3O95076 343 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 SLC25A16P16260 332 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 CPEP16870 476 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 USF1P22415 310 aaPredicted RBP11.52□□□□□ -0.57
UPK1A-201ENST00000222275 PRKACBP22694 351 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 COL8A2P25067 703 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 IL2RGP31785 369 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 GNG3P63215 75 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 CARTPTQ16568 116 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 ZNF181Q2M3W8 571 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 Q499Y3 187 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 UBE2UQ5VVX9 321 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 PLCXD3Q63HM9 321 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 PARP16Q8N5Y8 322 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 TSPAN14Q8NG11 270 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 ITLN1Q8WWA0 313 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 GTF3AQ92664 365 aaKnown RBP11.52□□□□□ -0.57
UPK1A-201ENST00000222275 SPSB1Q96BD6 273 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 FGGYQ96C11 551 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 CPNE2Q96FN4 548 aaPredicted RBP11.52□□□□□ -0.57
UPK1A-201ENST00000222275 TIMD4Q96H15 378 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 PGLYRP3Q96LB9 341 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 BPESC1Q9GZL8 116 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 CKLFQ9UBR5 152 aa11.52□□□□□ -0.57
UPK1A-201ENST00000222275 SIRT4Q9Y6E7 314 aaPredicted RBP11.52□□□□□ -0.57
UPK1A-201ENST00000222275 A8MV72 311 aaPredicted RBP11.51□□□□□ -0.57
UPK1A-201ENST00000222275 MAGEB3O15480 346 aa11.51□□□□□ -0.57
UPK1A-201ENST00000222275 NCR1O76036 304 aa11.51□□□□□ -0.57
UPK1A-201ENST00000222275 MAP2K4P45985 399 aa11.51□□□□□ -0.57
UPK1A-201ENST00000222275 FUT6P51993 359 aa11.51□□□□□ -0.57
UPK1A-201ENST00000222275 HNRNPA0Q13151 305 aaKnown RBP11.51□□□□□ -0.57
UPK1A-201ENST00000222275 MAB21L1Q13394 359 aa11.51□□□□□ -0.57
UPK1A-201ENST00000222275 FAM76BQ5HYJ3 339 aa11.51□□□□□ -0.57
UPK1A-201ENST00000222275 KCTD8Q6ZWB6 473 aa11.51□□□□□ -0.57
UPK1A-201ENST00000222275 ZNF573Q86YE8 665 aa11.51□□□□□ -0.57
UPK1A-201ENST00000222275 ZFP41Q8N8Y5 198 aa11.51□□□□□ -0.57
UPK1A-201ENST00000222275 DNAAF1Q8NEP3 725 aa11.51□□□□□ -0.57
UPK1A-201ENST00000222275 Q8TCH9 128 aa11.51□□□□□ -0.57
UPK1A-201ENST00000222275 PHYHIPQ92561 330 aa11.51□□□□□ -0.57
UPK1A-201ENST00000222275 MSI2Q96DH6 328 aaKnown RBP11.51□□□□□ -0.57
UPK1A-201ENST00000222275 PIMREGQ9BSJ6 248 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms