RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 AAMDCQ9H7C9 122 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 FAM166BA8MTA8 275 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 EFSO43281 561 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 FGF2P09038 288 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 HAGHQ16775 308 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 CORO6Q6QEF8 472 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 C1orf174Q8IYL3 243 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 TPPP3Q9BW30 176 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 ISG20L2Q9H9L3 353 aaKnown RBP11.28□□□□□ -0.6
LMCD1-201ENST00000157600 NIT2Q9NQR4 276 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 TRAV17A0A0B4J275 112 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 H0Y8X5 98 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 M0QZ24 198 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 PEX11BO96011 259 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 SBK3P0C264 359 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 PJVKQ0ZLH3 352 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 ZNF141Q15928 474 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 GSG1Q2KHT4 349 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 COX19Q49B96 90 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 SHANK3Q9BYB0 1731 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 PCBP3P57721 371 aaKnown RBP11.28□□□□□ -0.6
LMCD1-201ENST00000157600 ZNF574Q6ZN55 896 aaPredicted RBP11.28□□□□□ -0.6
LMCD1-201ENST00000157600 NUBPLQ8TB37 319 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 MARCH1Q8TCQ1 289 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 SAT2Q96F10 170 aaPredicted RBP11.28□□□□□ -0.6
LMCD1-201ENST00000157600 ADGRL4Q9HBW9 690 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 LRRC3CA6NJW4 275 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 PNRC1Q12796 327 aaPredicted RBP11.28□□□□□ -0.6
LMCD1-201ENST00000157600 CCDC74BQ96LY2 380 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 ZNF426Q9BUY5 554 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 SMIM17P0DL12 118 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 EMDP50402 254 aa11.28□□□□□ -0.6
LMCD1-201ENST00000157600 RPL11P62913 178 aaKnown RBP11.28□□□□□ -0.6
LMCD1-201ENST00000157600 ZNF707Q96C28 371 aaPredicted RBP11.28□□□□□ -0.6
LMCD1-201ENST00000157600 TMEFF2Q9UIK5 374 aaPredicted RBP11.28□□□□□ -0.6
LMCD1-201ENST00000157600 DIDO1Q9BTC0 2240 aaKnown RBP11.28□□□□□ -0.6
LMCD1-201ENST00000157600 ANKRD34CP0C6C1 535 aa11.27□□□□□ -0.6
LMCD1-201ENST00000157600 BAMBIQ13145 260 aa11.27□□□□□ -0.6
LMCD1-201ENST00000157600 FBXO4Q9UKT5 387 aa11.27□□□□□ -0.6
LMCD1-201ENST00000157600 FABP6P51161 128 aa11.27□□□□□ -0.6
LMCD1-201ENST00000157600 ZFP62Q8NB50 900 aaPredicted RBP11.27□□□□□ -0.6
LMCD1-201ENST00000157600 WNK2Q9Y3S1 2297 aa11.27□□□□□ -0.6
LMCD1-201ENST00000157600 METTL12A8MUP2 240 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 CYTIPO60759 359 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 RPA2P15927 270 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 HYAL4Q2M3T9 481 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 OR2T6Q8NHC8 308 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 MRGPRX3Q96LB0 322 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.27□□□□□ -0.61
LMCD1-201ENST00000157600 BRCA1P38398 1863 aaKnown RBP11.27□□□□□ -0.61
LMCD1-201ENST00000157600 RGS13O14921 159 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 TPPP2P59282 170 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 ADTRPQ96IZ2 230 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 SEBOXQ9HB31 216 aaPredicted RBP11.27□□□□□ -0.61
LMCD1-201ENST00000157600 KIAA2026Q5HYC2 2103 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 TOX4O94842 621 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 FGF7P21781 194 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 DCTDP32321 178 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 VMA21Q3ZAQ7 101 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 FBXW5Q969U6 566 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 OR2A5Q96R48 311 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 LRRC61Q9BV99 259 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 AUNIPQ9H7T9 357 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 PRDM7Q9NQW5 492 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 THYN1Q9P016 225 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 COX7A2P2O60397 106 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 LINC00596Q86U02 117 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 ZNRF4Q8WWF5 429 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 ATOH1Q92858 354 aaPredicted RBP11.27□□□□□ -0.61
LMCD1-201ENST00000157600 PIK3IP1Q96FE7 263 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 TMEM30AQ9NV96 361 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 A0A1W2PN81 502 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 CHRNA7P36544 502 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 CRYBB2P43320 205 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 IL13RA2Q14627 380 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 WDR73Q6P4I2 378 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 NUDCD2Q8WVJ2 157 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 UCK1Q9HA47 277 aa11.27□□□□□ -0.61
LMCD1-201ENST00000157600 C1orf53Q5VUE5 145 aa11.26□□□□□ -0.61
LMCD1-201ENST00000157600 WDR89Q96FK6 387 aaPredicted RBP11.26□□□□□ -0.61
LMCD1-201ENST00000157600 SPTBN2O15020 2390 aa11.26□□□□□ -0.61
LMCD1-201ENST00000157600 POLEQ07864 2286 aa11.26□□□□□ -0.61
LMCD1-201ENST00000157600 GREB1LQ9C091 1923 aaPredicted RBP11.26□□□□□ -0.61
LMCD1-201ENST00000157600 OPRM1P35372 400 aa11.26□□□□□ -0.61
LMCD1-201ENST00000157600 ADPRHL1Q8NDY3 354 aa11.26□□□□□ -0.61
LMCD1-201ENST00000157600 OR52N4Q8NGI2 321 aa11.26□□□□□ -0.61
LMCD1-201ENST00000157600 AMMECR1Q9Y4X0 333 aaPredicted RBP11.26□□□□□ -0.61
LMCD1-201ENST00000157600 ATP23Q9Y6H3 246 aa11.26□□□□□ -0.61
LMCD1-201ENST00000157600 AKR1C3P42330 323 aa11.26□□□□□ -0.61
LMCD1-201ENST00000157600 PTGFRP43088 359 aa11.26□□□□□ -0.61
LMCD1-201ENST00000157600 ANKRD10Q9NXR5 420 aa11.26□□□□□ -0.61
LMCD1-201ENST00000157600 NRG2O14511 850 aaPredicted RBP11.26□□□□□ -0.61
LMCD1-201ENST00000157600 PIAS2O75928 621 aa11.26□□□□□ -0.61
LMCD1-201ENST00000157600 PPP2CBP62714 309 aa11.26□□□□□ -0.61
LMCD1-201ENST00000157600 PPP2CAP67775 309 aa11.26□□□□□ -0.61
LMCD1-201ENST00000157600 XAF1Q6GPH4 301 aa11.26□□□□□ -0.61
LMCD1-201ENST00000157600 DERL3Q96Q80 235 aa11.26□□□□□ -0.61
LMCD1-201ENST00000157600 NUDT16L1Q9BRJ7 211 aaKnown RBP11.26□□□□□ -0.61
LMCD1-201ENST00000157600 SLC35B3Q9H1N7 401 aa11.26□□□□□ -0.61
LMCD1-201ENST00000157600 RNF167Q9H6Y7 350 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms