RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 TMEM229BQ8BFQ2 167 aa11.54□□□□□ -0.56
Nup88-203ENSMUST00000108531 Znf2Q8BIQ3 427 aa11.54□□□□□ -0.56
Nup88-203ENSMUST00000108531 Dhrs7cQ8CHS7 311 aa11.54□□□□□ -0.56
Nup88-203ENSMUST00000108531 CenpoQ8K015 298 aa11.54□□□□□ -0.56
Nup88-203ENSMUST00000108531 Sav1Q8VEB2 386 aa11.54□□□□□ -0.56
Nup88-203ENSMUST00000108531 Olfr539Q8VGL9 319 aa11.54□□□□□ -0.56
Nup88-203ENSMUST00000108531 Rap1bQ99JI6 184 aa11.54□□□□□ -0.56
Nup88-203ENSMUST00000108531 Arpc5Q9CPW4 151 aa11.54□□□□□ -0.56
Nup88-203ENSMUST00000108531 Pcbd2Q9CZL5 136 aa11.54□□□□□ -0.56
Nup88-203ENSMUST00000108531 Tmem30cQ9D4D7 342 aa11.54□□□□□ -0.56
Nup88-203ENSMUST00000108531 IcaQ9DBD0 700 aa11.54□□□□□ -0.56
Nup88-203ENSMUST00000108531 Twsg1Q9EP52 222 aa11.54□□□□□ -0.56
Nup88-203ENSMUST00000108531 Arr3Q9EQP6 381 aa11.54□□□□□ -0.56
Nup88-203ENSMUST00000108531 Hacd1Q9QY80 281 aa11.54□□□□□ -0.56
Nup88-203ENSMUST00000108531 Clcf1Q9QZM3 225 aa11.54□□□□□ -0.56
Nup88-203ENSMUST00000108531 Cdh23Q99PF4 3354 aa11.54□□□□□ -0.56
Nup88-203ENSMUST00000108531 Olfr1039A2ARY0 319 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 BC035044E0CXF8 138 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Aldh3a2P47740 484 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 A4gntQ14BT6 341 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Isg20l2Q3U1G5 368 aaKnown RBP11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 MybphlQ5FW53 355 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Olfr140Q60878 302 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Vmn1r21Q8R2C6 297 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Vmn1r37Q8R2E4 302 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Olfr307Q8VFN8 313 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Abhd17aQ99JW1 310 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 PpifQ99KR7 206 aaKnown RBP11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Irak1bp1Q9ESJ7 259 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 TollipQ9QZ06 274 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 SncgQ9Z0F7 123 aaKnown RBP11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Olfr1018A2ASV3 311 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Birc7A2AWP0 285 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Zfp961E9Q4R5 444 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Gm6465F7A7Y6 181 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Vmn2r58K7N6V2 862 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Sult2a4L7N245 285 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 MstnO08689 376 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Phb2O35129 299 aaKnown RBP11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 GzmdP11033 252 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 EbpP70245 230 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Casp3P70677 277 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Ear2P97425 156 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Nxt2Q3UNA4 142 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Amz2Q400C8 359 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Olfr1135Q7TR42 310 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 9130023H24RikQ8BG98 337 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Arrb1Q8BWG8 418 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 CcinQ8CDE2 588 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Vmn1r231Q8R2A3 311 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Olfr1122Q8VGT9 326 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Prss42Q8VIF2 335 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Slc33a1Q99J27 550 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Nudcd2Q9CQ48 157 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Cyc1Q9D0M3 325 aaKnown RBP11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Lin37Q9D8N6 246 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Olfr934Q9EQ87 310 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Olfr948Q9EQ95 321 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 Unc119Q9Z2R6 240 aa11.53□□□□□ -0.56
Nup88-203ENSMUST00000108531 A0A1L1SV24 88 aa11.52□□□□□ -0.56
Nup88-203ENSMUST00000108531 A0A286YDP4 300 aa11.52□□□□□ -0.56
Nup88-203ENSMUST00000108531 Dmrta2A2A9A2 531 aa11.52□□□□□ -0.56
Nup88-203ENSMUST00000108531 Tmem185aA2AF53 350 aa11.52□□□□□ -0.56
Nup88-203ENSMUST00000108531 Vmn2r76E9Q3F5 853 aa11.52□□□□□ -0.56
Nup88-203ENSMUST00000108531 Olfr1218L7MU54 311 aa11.52□□□□□ -0.56
Nup88-203ENSMUST00000108531 PipP02816 146 aa11.52□□□□□ -0.56
Nup88-203ENSMUST00000108531 Bmp8bP55105 399 aa11.52□□□□□ -0.56
Nup88-203ENSMUST00000108531 Klf16P58334 251 aa11.52□□□□□ -0.56
Nup88-203ENSMUST00000108531 Fv1P70213 459 aa11.52□□□□□ -0.56
Nup88-203ENSMUST00000108531 Rasl12Q08AT1 266 aa11.52□□□□□ -0.56
Nup88-203ENSMUST00000108531 Mfsd4b3Q3UN21 355 aa11.52□□□□□ -0.56
Nup88-203ENSMUST00000108531 ArhgdibQ61599 200 aaKnown RBP11.52□□□□□ -0.56
Nup88-203ENSMUST00000108531 Olfr1216Q7TR05 311 aa11.52□□□□□ -0.56
Nup88-203ENSMUST00000108531 CebpzosQ8BTE5 80 aa11.52□□□□□ -0.56
Nup88-203ENSMUST00000108531 Lrrc61Q8R2R5 259 aa11.52□□□□□ -0.56
Nup88-203ENSMUST00000108531 Olfr341Q8VGK9 313 aa11.52□□□□□ -0.56
Nup88-203ENSMUST00000108531 Atp5sQ9CRA7 200 aa11.52□□□□□ -0.56
Nup88-203ENSMUST00000108531 Nkx2-4Q9EQM3 354 aa11.52□□□□□ -0.56
Nup88-203ENSMUST00000108531 Gm21497A0A087WRK3 222 aa11.52□□□□□ -0.57
Nup88-203ENSMUST00000108531 KantrA0A1W2P7I0 76 aa11.52□□□□□ -0.57
Nup88-203ENSMUST00000108531 Gm20390E9PZF0 267 aa11.52□□□□□ -0.57
Nup88-203ENSMUST00000108531 Wdfy1E9Q4P1 410 aa11.52□□□□□ -0.57
Nup88-203ENSMUST00000108531 Gm5798F7BTS7 198 aa11.52□□□□□ -0.57
Nup88-203ENSMUST00000108531 Esp34G3UXG0 151 aa11.52□□□□□ -0.57
Nup88-203ENSMUST00000108531 Obox6G3X9U1 347 aa11.52□□□□□ -0.57
Nup88-203ENSMUST00000108531 Gm20939L7N243 523 aa11.52□□□□□ -0.57
Nup88-203ENSMUST00000108531 Emg1O35130 244 aaKnown RBP11.52□□□□□ -0.57
Nup88-203ENSMUST00000108531 Ccl22O88430 92 aa11.52□□□□□ -0.57
Nup88-203ENSMUST00000108531 Igkv7-33P01632 114 aa11.52□□□□□ -0.57
Nup88-203ENSMUST00000108531 Nme2Q01768 152 aa11.52□□□□□ -0.57
Nup88-203ENSMUST00000108531 CelQ64285 599 aa11.52□□□□□ -0.57
Nup88-203ENSMUST00000108531 Igsf21Q7TNR6 468 aa11.52□□□□□ -0.57
Nup88-203ENSMUST00000108531 Olfr527Q7TRT9 305 aa11.52□□□□□ -0.57
Nup88-203ENSMUST00000108531 Olfr259Q7TS20 312 aa11.52□□□□□ -0.57
Nup88-203ENSMUST00000108531 GnalQ8CGK7 381 aa11.52□□□□□ -0.57
Nup88-203ENSMUST00000108531 Vmn1r28Q8R2C9 302 aa11.52□□□□□ -0.57
Nup88-203ENSMUST00000108531 Olfr351Q8VGK1 310 aa11.52□□□□□ -0.57
Nup88-203ENSMUST00000108531 PsenenQ9CQR7 101 aa11.52□□□□□ -0.57
Nup88-203ENSMUST00000108531 Lysmd1Q9D0E3 226 aa11.52□□□□□ -0.57
Nup88-203ENSMUST00000108531 Aaed1Q9D1A0 226 aa11.52□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 81.4 ms