RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Lrrtm1Q8K377 522 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Trib1Q8K4K4 372 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Sectm1aQ921W8 192 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gfra4Q9JJT2 260 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Pnpla1Q3V1D5 599 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Pptc7Q6NVE9 310 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr193Q7TS43 309 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gm5447Q8BPB2 115 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Znf593Q9DB42 134 aaKnown RBP10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 BcorQ8CGN4 1759 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 MgmtP26187 211 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Bmpr1aP36895 532 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ctdsp1P58466 261 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 PdxpP60487 292 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr214Q8VG27 320 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Prl5a1Q9JII2 230 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 P01915 264 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 StsP50427 624 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Usf1Q61069 310 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 SrmsQ62270 496 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Mr1Q8HWB0 341 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Dlk2Q8K1E3 382 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 IdnkQ8R0J8 184 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Vmn1r8Q8R2C2 303 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Emc4Q9CZX9 183 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Oaz3Q9R109 243 aa10.93□□□□□ -0.66
Trim56-201ENSMUST00000054384 Zfp979A2A799 407 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 P01804 111 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Inpp5jP59644 1003 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 VegfdP97946 358 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr487Q7TRU9 314 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr406Q7TRX0 323 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Mic13Q8R404 119 aaKnown RBP10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Slco2a1Q9EPT5 643 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Scn11aQ9R053 1765 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Heatr5bQ8C547 2070 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Hspb1P14602 209 aaKnown RBP10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Hnrnpa3Q8BG05 379 aaKnown RBP10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Csnk1g1Q8BTH8 459 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Fam169bQ8CHT6 337 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr919Q8VF78 315 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 St3gal6Q8VIB3 329 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Malsu1Q9CWV0 228 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 BambiQ9D0L6 260 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Phospho2Q9D9M5 241 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Galnt16Q9JJ61 558 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ak3Q9WTP7 227 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gm4907B1AXB9 411 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gm17657E9PWY5 170 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gm15130F6PYN5 206 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ifna6P07350 189 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Fkbp2P45878 140 aaKnown RBP10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr1489Q8VFQ5 313 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr444Q8VFS6 310 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Trappc2lQ9JME7 139 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Mfsd2bQ3T9M1 494 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Adat3Q6PAT0 349 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Clec18aQ7TSQ1 534 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Acaa2Q8BWT1 397 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Coro2aQ8C0P5 524 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Q922R1 422 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Tmem128Q9CZB9 163 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Dimt1Q9D0D4 313 aaKnown RBP10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 PacrgQ9DAK2 241 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Lrrc51Q9DAK8 192 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Chst11Q9JME2 352 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Dmrt1Q9QZ59 374 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr228A0A1L1SR98 313 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr685A0A1L1SVG7 331 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 A0A286YDP4 300 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr287E9PZS7 322 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Pcmt1P23506 227 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Rpl27P61358 136 aaKnown RBP10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gpr137Q80ZU9 396 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Akr7a2Q8CG76 367 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 GhsrQ99P50 364 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Atp5sQ9CRA7 200 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Rps19Q9CZX8 145 aaKnown RBP10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ralgapa1Q6GYP7 2035 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr284A0A0U1RP76 321 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Fam90a1aA2A4E2 429 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 NptnP97300 397 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr1442Q0VEV7 312 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Slc26a11Q80ZD3 593 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Hes7Q8BKT2 225 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Dzank1Q8C008 778 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Poldip2Q91VA6 368 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gm438B1ASB3 393 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Trabd2bB1ATG9 517 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Pwwp2bE9Q9M8 600 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr141Q60880 325 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Hdac8Q8VH37 377 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Frmpd3A0A140LIW3 1774 aa10.92□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr1124A2AT86 318 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Daw1D3Z7A5 415 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 CatsperdE9Q9F6 805 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Gm6665F6Y363 85 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 PdgfbP31240 241 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Ube2fbQ3UWQ3 185 aa10.91□□□□□ -0.66
Trim56-201ENSMUST00000054384 Olfr1226Q8VGM5 310 aa10.91□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 45.2 ms