RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Arpc3Q9JM76 178 aaKnown RBP21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Znfx1Q8R151 1909 aaKnown RBP21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 P01669 111 aa21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Olfr1465Q7TQR2 307 aa21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Shisa7Q8C3Q5 558 aa21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Akr7a2Q8CG76 367 aa21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Mrpl41Q9CQN7 135 aaKnown RBP21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 D3Ertd254eA0A0G2JEM5 796 aa21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Zfp109A0A0U1RPC5 652 aa21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Gm20503G3UZK1 150 aa21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Barhl1P63157 327 aa21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 DbpQ60925 325 aa21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Coq3Q8BMS4 370 aa21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Adipor2Q8BQS5 386 aa21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Olfr1284Q8VF29 311 aa21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Sult2a2P50236 285 aa21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 BaxQ07813 192 aa21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Mbd3l2Q3UXB0 228 aa21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 F830045P16RikQ8BJ95 487 aa21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Acaa1bQ8VCH0 424 aa21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Acaa1aQ921H8 424 aaKnown RBP21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Ddb2Q99J79 432 aa21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Mid1ip1Q9CQ20 182 aa21.13■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Gm21820J3KMU2 361 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Fndc4Q3TR08 231 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 March1Q6NZQ8 289 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Vmn1r17Q8R2D8 303 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Ube2fQ9CY34 185 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Ube2dnl2A2AFH2 155 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Olfr1320A2AHM8 319 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Olfr914E9PW59 316 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Gm6576F6YTZ4 274 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Atf6bO35451 699 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Sft2d1Q5SSN7 159 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Olfr452Q7TRV8 317 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Ntng1Q8R4G0 539 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Olfr38Q8VGP4 317 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Mmp1aQ9EPL5 464 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Tjp1P39447 1745 aaKnown RBP21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 1700080E11RikE9Q9G1 206 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Rdh16f1E9Q9P8 317 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 H2-M1F7CXU4 344 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 HgdO09173 445 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Ube2mP61082 183 aaKnown RBP21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Nrsn2Q5HZK2 202 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Slc17a4Q5NCM1 492 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Mettl20Q80ZM3 255 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Tox4Q8BU11 619 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 MrgprdQ91ZB8 321 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Zfp964B2RR88 472 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 VegfdP97946 358 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Olfr1442Q0VEV7 312 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Olfr1211Q7TR09 311 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Ikzf5Q8BU00 419 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Zfpm2Q8CCH7 1151 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Mrps24Q9CQV5 167 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Jmjd6Q9ERI5 403 aa21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 StrapQ9Z1Z2 350 aaKnown RBP21.12■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Trav1A0A075B5Z4 110 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 P01670 111 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 P01671 111 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 P01672 111 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 P01807 119 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Sox7P40646 380 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Rpusd3Q14AI6 344 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Slc7a15Q50E62 488 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Fbxo22Q78JE5 402 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Gpr153Q8K0Z9 631 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Als2Q920R0 1651 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Vmn1r90A0A087WR36 309 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Il5P04401 133 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Zfp948Q6DFU8 667 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Vmn1r43Q8VIC9 329 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Slc7a12Q8VIE6 465 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Vmn1r180B9EK86 305 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Tgfbr3O88393 850 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Pif1Q80SX8 650 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Slc31a2Q9CPU9 143 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Zfp300A2AE21 645 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Ube2g1P62254 170 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 HfeP70387 359 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Scand1Q2M4I6 142 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Olfr923Q7TRB9 317 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 SccpdhQ8R127 429 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Rtp4Q9ER80 249 aaKnown RBP21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 RrhO35214 337 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Slc6a9P28571 692 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Znf770Q8BIQ8 705 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Gm9938Q8C3P5 112 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Sco2Q8VCL2 255 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Olfr1170Q8VFG1 316 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Minpp1Q9Z2L6 481 aa21.11■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Smn1P97801 288 aa21.1■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Olfr453Q7TRV7 317 aa21.1■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Olfr1270Q8VGP3 304 aa21.1■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Tmeff2Q9QYM9 374 aa21.1■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Olfr896-ps1A0A1L1SRZ8 308 aa21.1■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Gm15737D3YZR0 106 aa21.1■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Dynlrb1P62627 96 aa21.1■□□□□ 0.97
Sh3rf1-201ENSMUST00000034060 Acp5Q05117 327 aa21.1■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms