RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 PEG10Q86TG7 708 aaKnown RBP12.18□□□□□ -0.46
PHGDH-233ENST00000642021 LHFPL1Q86WI0 220 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 TGIF2Q9GZN2 237 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 RPS2P15880 293 aaKnown RBP12.18□□□□□ -0.46
PHGDH-233ENST00000642021 SFTPDP35247 375 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 NUBP1P53384 320 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 PNLIPRP3Q17RR3 467 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 HFEQ30201 348 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 RHBDD2Q6NTF9 364 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 OR5T2Q8NGG2 359 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 OR5H2Q8NGV7 314 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 RNF138Q8WVD3 245 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 MRGPRX4Q96LA9 322 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 C12orf57Q99622 126 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 RAB18Q9NP72 206 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 FAM96BQ9Y3D0 163 aa12.18□□□□□ -0.46
PHGDH-233ENST00000642021 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 GLB1P16278 677 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 AMY2BP19961 511 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 C10orf91Q5T1B1 145 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 PRSS54Q6PEW0 395 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 ZNF574Q6ZN55 896 aaPredicted RBP12.17□□□□□ -0.46
PHGDH-233ENST00000642021 ZNF283Q8N7M2 679 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 OR14K1Q8NGZ2 314 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 SLC26A1Q9H2B4 701 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 PISDQ9UG56 409 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 OSGIN2Q9Y236 505 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 PRELID3BQ9Y3B1 194 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 RALGAPA1Q6GYQ0 2036 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 PMS2P1A4D2B8 440 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 LINC00587B1AMM8 73 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 OR2J2O76002 312 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 HOXB5P09067 269 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 NPBWR1P48145 328 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 SNU13P55769 128 aaKnown RBP12.17□□□□□ -0.46
PHGDH-233ENST00000642021 FLI1Q01543 452 aaPredicted RBP12.17□□□□□ -0.46
PHGDH-233ENST00000642021 H3F3CQ6NXT2 135 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 CARFQ8N187 725 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 OR56B1Q8NGI3 324 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 OR51T1Q8NGJ9 327 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 ARL11Q969Q4 196 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 LYZL4Q96KX0 146 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 METTL8Q9H825 291 aaKnown RBP12.17□□□□□ -0.46
PHGDH-233ENST00000642021 MOB1AQ9H8S9 216 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 GSKIPQ9P0R6 139 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 CA14Q9ULX7 337 aa12.17□□□□□ -0.46
PHGDH-233ENST00000642021 IGLV3-12A0A075B6K2 115 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 IGKV1D-8A0A087WSZ0 117 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 ZNF705EA8MWA4 302 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-233ENST00000642021 LYL1P12980 280 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 CCL1P22362 96 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 FPR2P25090 351 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 IL15RAQ13261 267 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 NKAIN1Q4KMZ8 207 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 CCDC157Q569K6 752 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 SLC25A53Q5H9E4 307 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 HAGHLQ6PII5 290 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-233ENST00000642021 BCL2L14Q9BZR8 327 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 OR10A2Q9H208 303 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 HRH4Q9H3N8 390 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 TREM1Q9NP99 234 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 ACKR4Q9NPB9 350 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 TINAGQ9UJW2 476 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 H7C2Y5 167 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 SFTPCP11686 197 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 CSNK2A1P68400 391 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-233ENST00000642021 DCDP81605 110 aaKnown RBP12.16□□□□□ -0.46
PHGDH-233ENST00000642021 KISS1Q15726 138 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 TMEM176BQ3YBM2 270 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-233ENST00000642021 FOXRED2Q8IWF2 684 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 FAM89BQ8N5H3 189 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 CSNK2A3Q8NEV1 391 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 SLC5A7Q9GZV3 580 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 ZNF768Q9H5H4 540 aaKnown RBP12.16□□□□□ -0.46
PHGDH-233ENST00000642021 METTL7AQ9H8H3 244 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 WIF1Q9Y5W5 379 aa12.16□□□□□ -0.46
PHGDH-233ENST00000642021 NCOA6Q14686 2063 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-233ENST00000642021 FOXI3A8MTJ6 420 aaPredicted RBP12.15□□□□□ -0.46
PHGDH-233ENST00000642021 KNG1P01042 644 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 BLVRBP30043 206 aaPredicted RBP12.15□□□□□ -0.46
PHGDH-233ENST00000642021 OR3A2P47893 321 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 HIST3H3Q16695 136 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 PNLDC1Q8NA58 520 aaKnown RBP12.15□□□□□ -0.46
PHGDH-233ENST00000642021 POC1AQ8NBT0 407 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 OR6X1Q8NH79 312 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 CNTNAP3BQ96NU0 1288 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 AQP10Q96PS8 301 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 CDC6Q99741 560 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 UQCC1Q9NVA1 299 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 EHFQ9NZC4 300 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 MYOTQ9UBF9 498 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 CARHSP1Q9Y2V2 147 aaKnown RBP12.15□□□□□ -0.46
PHGDH-233ENST00000642021 EXPH5Q8NEV8 1989 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 CSTBP04080 98 aaKnown RBP12.15□□□□□ -0.46
PHGDH-233ENST00000642021 ZNF43P17038 809 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 RCC1P18754 421 aaPredicted RBP12.15□□□□□ -0.46
PHGDH-233ENST00000642021 PTGFRP43088 359 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 SLC6A9P48067 706 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 SPEM2Q0P670 501 aa12.15□□□□□ -0.46
PHGDH-233ENST00000642021 UBE2V2Q15819 145 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms