RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 SORDQ00796 357 aa14.92□□□□□ -0.02
PHGDH-211ENST00000641213 HGFACQ04756 655 aa14.92□□□□□ -0.02
PHGDH-211ENST00000641213 HLXQ14774 488 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-211ENST00000641213 MICBQ29980 383 aa14.92□□□□□ -0.02
PHGDH-211ENST00000641213 C3P1Q6ZMU1 363 aa14.92□□□□□ -0.02
PHGDH-211ENST00000641213 OR1F12Q8NHA8 337 aa14.92□□□□□ -0.02
PHGDH-211ENST00000641213 PCNPQ8WW12 178 aaKnown RBP14.92□□□□□ -0.02
PHGDH-211ENST00000641213 HAS2Q92819 552 aa14.92□□□□□ -0.02
PHGDH-211ENST00000641213 ZNF845Q96IR2 970 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-211ENST00000641213 OCSTAMPQ9BR26 566 aa14.92□□□□□ -0.02
PHGDH-211ENST00000641213 FN3KRPQ9HA64 309 aa14.92□□□□□ -0.02
PHGDH-211ENST00000641213 KCNN3Q9UGI6 736 aa14.92□□□□□ -0.02
PHGDH-211ENST00000641213 BOKQ9UMX3 212 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-211ENST00000641213 FOXI3A8MTJ6 420 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-211ENST00000641213 NEURL1O76050 574 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 IL2RAP01589 272 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 PPP3CBP16298 524 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 MGMTP16455 207 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 ZNF32P17041 273 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 GMFBP60983 142 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 PPP1R1AQ13522 171 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 OR5M8Q8NGP6 311 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 OR10K1Q8NGX5 313 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 OR2AE1Q8NHA4 323 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 PIGTQ969N2 578 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 GPR87Q9BY21 358 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 ZNF230Q9UIE0 474 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-211ENST00000641213 NOP16Q9Y3C1 178 aaKnown RBP14.91□□□□□ -0.02
PHGDH-211ENST00000641213 NCOR1O75376 2440 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 AHCTF1Q8WYP5 2266 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 GPR179Q6PRD1 2367 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 MED13Q9UHV7 2174 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 TERTO14746 1132 aaKnown RBP14.91□□□□□ -0.02
PHGDH-211ENST00000641213 CYTIPO60759 359 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 PATE4P0C8F1 98 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 SERPINA2P20848 420 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 ACKR3P25106 362 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 SCRN3Q0VDG4 424 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 CEACAM16Q2WEN9 425 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 JMJD6Q6NYC1 403 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-211ENST00000641213 SLC16A14Q7RTX9 510 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.91□□□□□ -0.02
PHGDH-211ENST00000641213 OR2M7Q8NG81 312 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 ABHD3Q8WU67 409 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 CPNE4Q96A23 557 aaPredicted RBP14.91□□□□□ -0.02
PHGDH-211ENST00000641213 SIGLEC12Q96PQ1 595 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 FOXB1Q99853 325 aa14.91□□□□□ -0.02
PHGDH-211ENST00000641213 TRAV14DV4A0A0A6YYC5 116 aa14.9□□□□□ -0.02
PHGDH-211ENST00000641213 C9orf170A2RU37 121 aa14.9□□□□□ -0.02
PHGDH-211ENST00000641213 OR6C6A6NF89 314 aa14.9□□□□□ -0.02
PHGDH-211ENST00000641213 RFPL4AA6NLU0 287 aa14.9□□□□□ -0.02
PHGDH-211ENST00000641213 RFPL4AL1F8VTS6 287 aa14.9□□□□□ -0.02
PHGDH-211ENST00000641213 CD8AP01732 235 aa14.9□□□□□ -0.02
PHGDH-211ENST00000641213 SRSF4Q08170 494 aaKnown RBP14.9□□□□□ -0.02
PHGDH-211ENST00000641213 GK2Q14410 553 aaPredicted RBP14.9□□□□□ -0.02
PHGDH-211ENST00000641213 KRTAP27-1Q3LI81 207 aa14.9□□□□□ -0.02
PHGDH-211ENST00000641213 RIPPLY2Q5TAB7 128 aa14.9□□□□□ -0.02
PHGDH-211ENST00000641213 TMEM164Q5U3C3 297 aa14.9□□□□□ -0.02
PHGDH-211ENST00000641213 FAHD2BQ6P2I3 314 aaPredicted RBP14.9□□□□□ -0.02
PHGDH-211ENST00000641213 HOGA1Q86XE5 327 aa14.9□□□□□ -0.02
PHGDH-211ENST00000641213 ADAD2Q8NCV1 583 aaKnown RBP14.9□□□□□ -0.02
PHGDH-211ENST00000641213 SEMA6DQ8NFY4 1073 aa14.9□□□□□ -0.02
PHGDH-211ENST00000641213 AKR7LQ8NHP1 331 aa14.9□□□□□ -0.02
PHGDH-211ENST00000641213 FBXW5Q969U6 566 aa14.9□□□□□ -0.02
PHGDH-211ENST00000641213 FAHD2AQ96GK7 314 aa14.9□□□□□ -0.02
PHGDH-211ENST00000641213 REEP6Q96HR9 211 aa14.9□□□□□ -0.02
PHGDH-211ENST00000641213 FAM173AQ9BQD7 235 aa14.9□□□□□ -0.02
PHGDH-211ENST00000641213 GSX2Q9BZM3 304 aa14.9□□□□□ -0.02
PHGDH-211ENST00000641213 GPR35Q9HC97 309 aa14.9□□□□□ -0.02
PHGDH-211ENST00000641213 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.9□□□□□ -0.02
PHGDH-211ENST00000641213 FREM1Q5H8C1 2179 aa14.9□□□□□ -0.02
PHGDH-211ENST00000641213 DHRS7CA6NNS2 312 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 C21orf140B9A014 251 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 PSG4Q00888 419 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 ARFRP1Q13795 201 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 NHLRC3Q5JS37 347 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 VAX1Q5SQQ9 334 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 ABHD17BQ5VST6 288 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 LPCAT3Q6P1A2 487 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 FGFBP3Q8TAT2 258 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 MARCH1Q8TCQ1 289 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 MITD1Q8WV92 249 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 S100A13Q99584 98 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 ARL6Q9H0F7 186 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 GPR173Q9NS66 373 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 EFSO43281 561 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 MT-CO3P00414 261 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 BLVRBP30043 206 aaPredicted RBP14.89□□□□□ -0.03
PHGDH-211ENST00000641213 RFC3P40938 356 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 CBX5P45973 191 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 P2RX3P56373 397 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 RAB14P61106 215 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 IL13RA1P78552 427 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 RIPPLY1Q0D2K3 151 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 ACTBL2Q562R1 376 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 PDSS1Q5T2R2 415 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 TERB2Q8NHR7 220 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 ST8SIA4Q92187 359 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 TM2D1Q9BX74 207 aa14.89□□□□□ -0.03
PHGDH-211ENST00000641213 PECRQ9BY49 303 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms