RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 ARHGAP32A7KAX9 2087 aa22.38■■□□□ 1.17
VEGFA-231ENST00000640499 B4DSR2 109 aa22.37■■□□□ 1.17
VEGFA-231ENST00000640499 J3QLW9 94 aa22.37■■□□□ 1.17
VEGFA-231ENST00000640499 FSTL3O95633 263 aa22.37■■□□□ 1.17
VEGFA-231ENST00000640499 LIMS3P0CW19 117 aa22.37■■□□□ 1.17
VEGFA-231ENST00000640499 LIMS4P0CW20 117 aa22.37■■□□□ 1.17
VEGFA-231ENST00000640499 ZNF19P17023 458 aa22.37■■□□□ 1.17
VEGFA-231ENST00000640499 AQP4P55087 323 aa22.37■■□□□ 1.17
VEGFA-231ENST00000640499 CSNK2BP67870 215 aa22.37■■□□□ 1.17
VEGFA-231ENST00000640499 RIPPLY1Q0D2K3 151 aa22.37■■□□□ 1.17
VEGFA-231ENST00000640499 TMEM42Q69YG0 159 aa22.37■■□□□ 1.17
VEGFA-231ENST00000640499 FAM166AQ6J272 317 aa22.37■■□□□ 1.17
VEGFA-231ENST00000640499 RDH10Q8IZV5 341 aa22.37■■□□□ 1.17
VEGFA-231ENST00000640499 SETD9Q8NE22 299 aa22.37■■□□□ 1.17
VEGFA-231ENST00000640499 JAM3Q9BX67 310 aa22.37■■□□□ 1.17
VEGFA-231ENST00000640499 TLNRD1Q9H1K6 362 aa22.37■■□□□ 1.17
VEGFA-231ENST00000640499 LPAR2Q9HBW0 351 aa22.37■■□□□ 1.17
VEGFA-231ENST00000640499 UBAP1Q9NZ09 502 aa22.37■■□□□ 1.17
VEGFA-231ENST00000640499 RNF7Q9UBF6 113 aa22.37■■□□□ 1.17
VEGFA-231ENST00000640499 HSPE1-MOB4S4R3N1 261 aa22.37■■□□□ 1.17
VEGFA-231ENST00000640499 A6NIN4 97 aa22.36■■□□□ 1.17
VEGFA-231ENST00000640499 LRRC30A6NM36 301 aa22.36■■□□□ 1.17
VEGFA-231ENST00000640499 C3orf80F5H4A9 247 aa22.36■■□□□ 1.17
VEGFA-231ENST00000640499 H3BSH0 61 aa22.36■■□□□ 1.17
VEGFA-231ENST00000640499 LHBP01229 141 aa22.36■■□□□ 1.17
VEGFA-231ENST00000640499 MDH2P40926 338 aaKnown RBP22.36■■□□□ 1.17
VEGFA-231ENST00000640499 SNCBQ16143 134 aa22.36■■□□□ 1.17
VEGFA-231ENST00000640499 KLHL22Q53GT1 634 aa22.36■■□□□ 1.17
VEGFA-231ENST00000640499 FTMTQ8N4E7 242 aa22.36■■□□□ 1.17
VEGFA-231ENST00000640499 GCSAMQ8N6F7 178 aa22.36■■□□□ 1.17
VEGFA-231ENST00000640499 TMEM246Q9BRR3 403 aa22.36■■□□□ 1.17
VEGFA-231ENST00000640499 PATZ1Q9HBE1 687 aaKnown RBP22.36■■□□□ 1.17
VEGFA-231ENST00000640499 PPIAL4EA0A075B759 164 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 E9PI62 339 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 F5H0A9 414 aaPredicted RBP22.35■■□□□ 1.17
VEGFA-231ENST00000640499 PPIAL4DF5H284 164 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 PLPP2O43688 288 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 CRLF1O75462 422 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 MSMBP08118 114 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 PPIAL4FP0DN26 164 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 EGR1P18146 543 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 ZFP36P26651 326 aaKnown RBP22.35■■□□□ 1.17
VEGFA-231ENST00000640499 SEC61A1P61619 476 aaKnown RBP22.35■■□□□ 1.17
VEGFA-231ENST00000640499 MZT1Q08AG7 82 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 ZNF404Q494X3 552 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 CEP78Q5JTW2 689 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 ZBTB37Q5TC79 503 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 FAM220AQ7Z4H9 259 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 ZDHHC23Q8IYP9 409 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 OR11L1Q8NGX0 322 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 POM121Q96HA1 1249 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 RNF170Q96K19 258 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 MICU1Q9BPX6 476 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 INPP5EQ9NRR6 644 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 TMEM160Q9NX00 188 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 PPIAL4AQ9Y536 164 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 NAV3Q8IVL0 2385 aa22.35■■□□□ 1.17
VEGFA-231ENST00000640499 A6NLC8 198 aa22.34■■□□□ 1.17
VEGFA-231ENST00000640499 CEACAM18A8MTB9 384 aa22.34■■□□□ 1.17
VEGFA-231ENST00000640499 TNFRSF13BO14836 293 aaPredicted RBP22.34■■□□□ 1.17
VEGFA-231ENST00000640499 MTRF1O75570 445 aaKnown RBP22.34■■□□□ 1.17
VEGFA-231ENST00000640499 WNT2P09544 360 aa22.34■■□□□ 1.17
VEGFA-231ENST00000640499 ETV1P50549 477 aa22.34■■□□□ 1.17
VEGFA-231ENST00000640499 DVL1P1P54792 670 aaPredicted RBP22.34■■□□□ 1.17
VEGFA-231ENST00000640499 WDR82Q6UXN9 313 aa22.34■■□□□ 1.17
VEGFA-231ENST00000640499 DOK3Q7L591 496 aa22.34■■□□□ 1.17
VEGFA-231ENST00000640499 C1orf87Q8N0U7 546 aa22.34■■□□□ 1.17
VEGFA-231ENST00000640499 SYS1Q8N2H4 156 aa22.34■■□□□ 1.17
VEGFA-231ENST00000640499 GGHQ92820 318 aa22.34■■□□□ 1.17
VEGFA-231ENST00000640499 RPL3LQ92901 407 aaKnown RBP22.34■■□□□ 1.17
VEGFA-231ENST00000640499 RAB39BQ96DA2 213 aa22.34■■□□□ 1.17
VEGFA-231ENST00000640499 RTL8AQ9BWD3 113 aa22.34■■□□□ 1.17
VEGFA-231ENST00000640499 ENPP5Q9UJA9 477 aa22.34■■□□□ 1.17
VEGFA-231ENST00000640499 ANXA2P2A6NMY6 339 aa22.33■■□□□ 1.17
VEGFA-231ENST00000640499 H0YJX3 145 aa22.33■■□□□ 1.17
VEGFA-231ENST00000640499 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP22.33■■□□□ 1.17
VEGFA-231ENST00000640499 CDIPTO14735 213 aa22.33■■□□□ 1.17
VEGFA-231ENST00000640499 ACTA2P62736 377 aa22.33■■□□□ 1.17
VEGFA-231ENST00000640499 ACTG2P63267 376 aa22.33■■□□□ 1.17
VEGFA-231ENST00000640499 CEACAM21Q3KPI0 293 aa22.33■■□□□ 1.17
VEGFA-231ENST00000640499 LYPD2Q6UXB3 125 aa22.33■■□□□ 1.17
VEGFA-231ENST00000640499 MOB3CQ70IA8 216 aa22.33■■□□□ 1.17
VEGFA-231ENST00000640499 THAP5Q7Z6K1 395 aa22.33■■□□□ 1.17
VEGFA-231ENST00000640499 C8orf59Q8N0T1 100 aaPredicted RBP22.33■■□□□ 1.17
VEGFA-231ENST00000640499 SPICQ8N5J4 248 aa22.33■■□□□ 1.17
VEGFA-231ENST00000640499 DEFB108BQ8NET1 73 aa22.33■■□□□ 1.17
VEGFA-231ENST00000640499 VCXQ9H320 206 aa22.33■■□□□ 1.17
VEGFA-231ENST00000640499 ABCB9Q9NP78 766 aa22.33■■□□□ 1.17
VEGFA-231ENST00000640499 KCNS2Q9ULS6 477 aa22.33■■□□□ 1.17
VEGFA-231ENST00000640499 OR4C45A6NMZ5 311 aa22.32■■□□□ 1.16
VEGFA-231ENST00000640499 IRF2P14316 349 aa22.32■■□□□ 1.16
VEGFA-231ENST00000640499 CD80P33681 288 aa22.32■■□□□ 1.16
VEGFA-231ENST00000640499 SFRP4Q6FHJ7 346 aaPredicted RBP22.32■■□□□ 1.16
VEGFA-231ENST00000640499 EGFL6Q8IUX8 553 aa22.32■■□□□ 1.16
VEGFA-231ENST00000640499 MUC20Q8N307 709 aaPredicted RBP22.32■■□□□ 1.16
VEGFA-231ENST00000640499 KLHL36Q8N4N3 616 aa22.32■■□□□ 1.16
VEGFA-231ENST00000640499 BOLLQ8N9W6 283 aaKnown RBP22.32■■□□□ 1.16
VEGFA-231ENST00000640499 SCCPDHQ8NBX0 429 aa22.32■■□□□ 1.16
VEGFA-231ENST00000640499 TMEM186Q96B77 213 aa22.32■■□□□ 1.16
VEGFA-231ENST00000640499 OR51I2Q9H344 312 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms