RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 NUBPLQ8TB37 319 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 WIF1Q9Y5W5 379 aa12.87□□□□□ -0.35
SCARB2-221ENST00000640341 LRP3O75074 770 aa12.86□□□□□ -0.35
SCARB2-221ENST00000640341 PNLIPP16233 465 aa12.86□□□□□ -0.35
SCARB2-221ENST00000640341 ZNF17P17021 662 aa12.86□□□□□ -0.35
SCARB2-221ENST00000640341 SP6Q3SY56 376 aa12.86□□□□□ -0.35
SCARB2-221ENST00000640341 GUSBP11Q6P575 273 aa12.86□□□□□ -0.35
SCARB2-221ENST00000640341 PLPP5Q8NEB5 264 aa12.86□□□□□ -0.35
SCARB2-221ENST00000640341 OR2AE1Q8NHA4 323 aa12.86□□□□□ -0.35
SCARB2-221ENST00000640341 MRPL13Q9BYD1 178 aaKnown RBP12.86□□□□□ -0.35
SCARB2-221ENST00000640341 MYOZ1Q9NP98 299 aaPredicted RBP12.86□□□□□ -0.35
SCARB2-221ENST00000640341 PLEK2Q9NYT0 353 aa12.86□□□□□ -0.35
SCARB2-221ENST00000640341 AHCTF1Q8WYP5 2266 aa12.86□□□□□ -0.35
SCARB2-221ENST00000640341 ZNHIT1O43257 154 aa12.86□□□□□ -0.35
SCARB2-221ENST00000640341 TRAF3IP2O43734 574 aaPredicted RBP12.86□□□□□ -0.35
SCARB2-221ENST00000640341 MED6O75586 246 aa12.86□□□□□ -0.35
SCARB2-221ENST00000640341 TMEM225BP0DP42 221 aa12.86□□□□□ -0.35
SCARB2-221ENST00000640341 RRADP55042 308 aa12.86□□□□□ -0.35
SCARB2-221ENST00000640341 TAS2R31P59538 309 aa12.86□□□□□ -0.35
SCARB2-221ENST00000640341 FXYD4P59646 89 aa12.86□□□□□ -0.35
SCARB2-221ENST00000640341 ZNF574Q6ZN55 896 aaPredicted RBP12.86□□□□□ -0.35
SCARB2-221ENST00000640341 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.86□□□□□ -0.35
SCARB2-221ENST00000640341 CNTNAP3BQ96NU0 1288 aa12.86□□□□□ -0.35
SCARB2-221ENST00000640341 GPR132Q9UNW8 380 aa12.86□□□□□ -0.35
SCARB2-221ENST00000640341 PRRC2CQ9Y520 2896 aaKnown RBP12.86□□□□□ -0.35
SCARB2-221ENST00000640341 FAM230AA0A1W2PPH8 454 aa12.85□□□□□ -0.35
SCARB2-221ENST00000640341 NPBWR1P48145 328 aa12.85□□□□□ -0.35
SCARB2-221ENST00000640341 SPAG16Q8N0X2 631 aa12.85□□□□□ -0.35
SCARB2-221ENST00000640341 SLC39A7Q92504 469 aa12.85□□□□□ -0.35
SCARB2-221ENST00000640341 DYRK2Q92630 601 aa12.85□□□□□ -0.35
SCARB2-221ENST00000640341 UCN2Q96RP3 112 aa12.85□□□□□ -0.35
SCARB2-221ENST00000640341 PLEKHJ1Q9NW61 149 aa12.85□□□□□ -0.35
SCARB2-221ENST00000640341 PIGLQ9Y2B2 252 aa12.85□□□□□ -0.35
SCARB2-221ENST00000640341 SFT2D2O95562 160 aa12.85□□□□□ -0.35
SCARB2-221ENST00000640341 PATE4P0C8F1 98 aa12.85□□□□□ -0.35
SCARB2-221ENST00000640341 SUPT4H1P63272 117 aaKnown RBP12.85□□□□□ -0.35
SCARB2-221ENST00000640341 IAH1Q2TAA2 248 aaPredicted RBP12.85□□□□□ -0.35
SCARB2-221ENST00000640341 OR2A2Q6IF42 318 aa12.85□□□□□ -0.35
SCARB2-221ENST00000640341 RHBDD2Q6NTF9 364 aa12.85□□□□□ -0.35
SCARB2-221ENST00000640341 PHYHIPLQ96FC7 376 aa12.85□□□□□ -0.35
SCARB2-221ENST00000640341 ZNF581Q9P0T4 197 aa12.85□□□□□ -0.35
SCARB2-221ENST00000640341 ZNF107Q9UII5 783 aaPredicted RBP12.85□□□□□ -0.35
SCARB2-221ENST00000640341 IGKV1D-8A0A087WSZ0 117 aa12.85□□□□□ -0.35
SCARB2-221ENST00000640341 ZFAND5O76080 213 aa12.85□□□□□ -0.35
SCARB2-221ENST00000640341 RBMXP38159 391 aaKnown RBP12.85□□□□□ -0.35
SCARB2-221ENST00000640341 CYCSP99999 105 aaKnown RBP12.85□□□□□ -0.35
SCARB2-221ENST00000640341 TAF9Q16594 264 aa12.85□□□□□ -0.35
SCARB2-221ENST00000640341 DTX1Q86Y01 620 aa12.85□□□□□ -0.35
SCARB2-221ENST00000640341 MRGPRX4Q96LA9 322 aa12.85□□□□□ -0.35
SCARB2-221ENST00000640341 GPR173Q9NS66 373 aa12.85□□□□□ -0.35
SCARB2-221ENST00000640341 SPRY1O43609 319 aaPredicted RBP12.84□□□□□ -0.35
SCARB2-221ENST00000640341 PTGFRP43088 359 aa12.84□□□□□ -0.35
SCARB2-221ENST00000640341 DCDP81605 110 aaKnown RBP12.84□□□□□ -0.35
SCARB2-221ENST00000640341 CPEB2Q7Z5Q1 589 aaKnown RBP12.84□□□□□ -0.35
SCARB2-221ENST00000640341 NFAM1Q8NET5 270 aaPredicted RBP12.84□□□□□ -0.35
SCARB2-221ENST00000640341 OR5L2Q8NGL0 311 aa12.84□□□□□ -0.35
SCARB2-221ENST00000640341 ZNF385AQ96PM9 386 aaKnown RBP12.84□□□□□ -0.35
SCARB2-221ENST00000640341 ZNF2Q9BSG1 426 aaPredicted RBP12.84□□□□□ -0.35
SCARB2-221ENST00000640341 RTBDNQ9BSG5 229 aaPredicted RBP12.84□□□□□ -0.35
SCARB2-221ENST00000640341 SRPK3Q9UPE1 567 aa12.84□□□□□ -0.35
SCARB2-221ENST00000640341 HPNP05981 417 aa12.84□□□□□ -0.35
SCARB2-221ENST00000640341 AFF3P51826 1226 aaKnown RBP12.84□□□□□ -0.35
SCARB2-221ENST00000640341 ACY1Q03154 408 aa12.84□□□□□ -0.35
SCARB2-221ENST00000640341 STK11Q15831 433 aa12.84□□□□□ -0.35
SCARB2-221ENST00000640341 TSPO2Q5TGU0 170 aa12.84□□□□□ -0.35
SCARB2-221ENST00000640341 OR4A4PQ8NGN8 299 aa12.84□□□□□ -0.35
SCARB2-221ENST00000640341 STOML3Q8TAV4 291 aa12.84□□□□□ -0.35
SCARB2-221ENST00000640341 C1orf147Q96MC9 270 aaPredicted RBP12.84□□□□□ -0.35
SCARB2-221ENST00000640341 RAB33BQ9H082 229 aa12.84□□□□□ -0.35
SCARB2-221ENST00000640341 RARRES3Q9UL19 164 aa12.84□□□□□ -0.35
SCARB2-221ENST00000640341 C14orf166Q9Y224 244 aaKnown RBP12.84□□□□□ -0.35
SCARB2-221ENST00000640341 C10orf142B7Z368 130 aa12.84□□□□□ -0.35
SCARB2-221ENST00000640341 SCGNO76038 276 aa12.84□□□□□ -0.35
SCARB2-221ENST00000640341 GSTP1P09211 210 aaKnown RBP12.84□□□□□ -0.35
SCARB2-221ENST00000640341 SRFP11831 508 aa12.84□□□□□ -0.35
SCARB2-221ENST00000640341 CD80P33681 288 aa12.84□□□□□ -0.35
SCARB2-221ENST00000640341 GPR85P60893 370 aa12.84□□□□□ -0.35
SCARB2-221ENST00000640341 UBE2V2Q15819 145 aa12.84□□□□□ -0.35
SCARB2-221ENST00000640341 ZNF837Q96EG3 531 aaPredicted RBP12.84□□□□□ -0.35
SCARB2-221ENST00000640341 RASL10BQ96S79 203 aa12.84□□□□□ -0.35
SCARB2-221ENST00000640341 PURGQ9UJV8 347 aaKnown RBP12.84□□□□□ -0.35
SCARB2-221ENST00000640341 TLX3O43711 291 aaPredicted RBP12.83□□□□□ -0.36
SCARB2-221ENST00000640341 CSNK1A1P48729 337 aa12.83□□□□□ -0.36
SCARB2-221ENST00000640341 RIPPLY1Q0D2K3 151 aa12.83□□□□□ -0.36
SCARB2-221ENST00000640341 ETV3LQ6ZN32 361 aa12.83□□□□□ -0.36
SCARB2-221ENST00000640341 DOK3Q7L591 496 aa12.83□□□□□ -0.36
SCARB2-221ENST00000640341 NECAB3Q96P71 396 aaPredicted RBP12.83□□□□□ -0.36
SCARB2-221ENST00000640341 TAF9BQ9HBM6 251 aa12.83□□□□□ -0.36
SCARB2-221ENST00000640341 SLC33A1O00400 549 aaPredicted RBP12.83□□□□□ -0.36
SCARB2-221ENST00000640341 PHYHD1Q5SRE7 291 aa12.83□□□□□ -0.36
SCARB2-221ENST00000640341 FAHD2BQ6P2I3 314 aaPredicted RBP12.83□□□□□ -0.36
SCARB2-221ENST00000640341 PEG10Q86TG7 708 aaKnown RBP12.83□□□□□ -0.36
SCARB2-221ENST00000640341 ARRDC1Q8N5I2 433 aa12.83□□□□□ -0.36
SCARB2-221ENST00000640341 FAHD2AQ96GK7 314 aa12.83□□□□□ -0.36
SCARB2-221ENST00000640341 NMES1Q9C002 83 aa12.83□□□□□ -0.36
SCARB2-221ENST00000640341 CYTL1Q9NRR1 136 aa12.83□□□□□ -0.36
SCARB2-221ENST00000640341 PI4KAP42356 2102 aa12.83□□□□□ -0.36
SCARB2-221ENST00000640341 ZNF850A8MQ14 1090 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 NPIPA2E9PIF3 369 aa12.82□□□□□ -0.36
SCARB2-221ENST00000640341 NPIPA3F8WFD2 350 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms