RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 ALG8Q9BVK2 526 aa6.93□□□□□ -1.3
SCARB2-220ENST00000640076 ZNF416Q9BWM5 594 aa6.93□□□□□ -1.3
SCARB2-220ENST00000640076 MND1Q9BWT6 205 aa6.93□□□□□ -1.3
SCARB2-220ENST00000640076 TTTY10Q9BZA0 68 aa6.93□□□□□ -1.3
SCARB2-220ENST00000640076 SIAEQ9HAT2 523 aa6.93□□□□□ -1.3
SCARB2-220ENST00000640076 VCX3AQ9NNX9 186 aa6.93□□□□□ -1.3
SCARB2-220ENST00000640076 TRIM36Q9NQ86 728 aa6.93□□□□□ -1.3
SCARB2-220ENST00000640076 TUBG2Q9NRH3 451 aa6.93□□□□□ -1.3
SCARB2-220ENST00000640076 PROCRQ9UNN8 238 aa6.93□□□□□ -1.3
SCARB2-220ENST00000640076 PLEKHA6Q9Y2H5 1048 aa6.93□□□□□ -1.3
SCARB2-220ENST00000640076 POLR1DQ9Y2S0 133 aa6.93□□□□□ -1.3
SCARB2-220ENST00000640076 LSM2Q9Y333 95 aaKnown RBP6.93□□□□□ -1.3
SCARB2-220ENST00000640076 ZNF462Q96JM2 2506 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 TRBV2A0A0J9YWF9 115 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 TMEM210A6NLX4 147 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 HSPB2A8KAH6 182 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 PRR32B1ATL7 298 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 MYL12BO14950 172 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 JUNBP17275 347 aaPredicted RBP6.92□□□□□ -1.3
SCARB2-220ENST00000640076 ALDH3B2P48448 385 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 WNT4P56705 351 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 ACSM1Q08AH1 577 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 EIF2B1Q14232 305 aaKnown RBP6.92□□□□□ -1.3
SCARB2-220ENST00000640076 SPHARQ15513 63 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 HSPB2Q16082 182 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 CDONQ4KMG0 1287 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 HIKESHIQ53FT3 197 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 SOWAHCQ53LP3 525 aaPredicted RBP6.92□□□□□ -1.3
SCARB2-220ENST00000640076 ZNF684Q5T5D7 378 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 C9orf135Q5VTT2 229 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 UBE2UQ5VVX9 321 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 SFRP4Q6FHJ7 346 aaPredicted RBP6.92□□□□□ -1.3
SCARB2-220ENST00000640076 ZNF322Q6U7Q0 402 aaPredicted RBP6.92□□□□□ -1.3
SCARB2-220ENST00000640076 Q6ZT83 130 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 DCXRQ7Z4W1 244 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 GABRG1Q8N1C3 465 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 BATF2Q8N1L9 274 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 SLC22A24Q8N4F4 322 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 KLHL36Q8N4N3 616 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 OR52N1Q8NH53 320 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 RNASE8Q8TDE3 154 aaKnown RBP6.92□□□□□ -1.3
SCARB2-220ENST00000640076 THEM6Q8WUY1 208 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 OR5M11Q96RB7 305 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 KCNS3Q9BQ31 491 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 OPN3Q9H1Y3 402 aaPredicted RBP6.92□□□□□ -1.3
SCARB2-220ENST00000640076 MEMO1Q9Y316 297 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 PRR14LQ5THK1 2151 aa6.92□□□□□ -1.3
SCARB2-220ENST00000640076 LGALS8O00214 317 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 PHYHO14832 338 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 MAGEB4O15481 346 aaPredicted RBP6.91□□□□□ -1.3
SCARB2-220ENST00000640076 WNT11O96014 354 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 HOXB5P09067 269 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 CST2P09228 141 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 COX5AP20674 150 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 IGHV1-2P23083 117 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 OPRM1P35372 400 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 RPL5P46777 297 aaKnown RBP6.91□□□□□ -1.3
SCARB2-220ENST00000640076 SELENOVP59797 346 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 ACTA2P62736 377 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 ACTG2P63267 376 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 SPTBN1Q01082 2364 aaKnown RBP6.91□□□□□ -1.3
SCARB2-220ENST00000640076 AQP6Q13520 282 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 SYT6Q5T7P8 510 aaPredicted RBP6.91□□□□□ -1.3
SCARB2-220ENST00000640076 TMEM211Q6ICI0 200 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 TMEM88Q6PEY1 159 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 TMPRSS11AQ6ZMR5 421 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 ZNF367Q7RTV3 350 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 SYS1Q8N2H4 156 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 LRRC18Q8N456 261 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 OR52N5Q8NH56 324 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 ANGPTL6Q8NI99 470 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 CD300LFQ8TDQ1 290 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 ASB17Q8WXJ9 295 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 RORBQ92753 470 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 SSX3Q99909 188 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 CITED1Q99966 193 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 ISG20L2Q9H9L3 353 aaKnown RBP6.91□□□□□ -1.3
SCARB2-220ENST00000640076 ZNF629Q9UEG4 869 aaPredicted RBP6.91□□□□□ -1.3
SCARB2-220ENST00000640076 ADGRG4Q8IZF6 3080 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 MEX3AA1L020 520 aaKnown RBP6.91□□□□□ -1.3
SCARB2-220ENST00000640076 J3QLW9 94 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 RER1O15258 196 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 SULT1C4O75897 302 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 FARS2O95363 451 aaKnown RBP6.91□□□□□ -1.3
SCARB2-220ENST00000640076 ZNF19P17023 458 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 BMP5P22003 454 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 PSMB9P28065 219 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 ALDH3B1P43353 468 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 GP2P55259 537 aaKnown RBP6.91□□□□□ -1.3
SCARB2-220ENST00000640076 OR12D2P58182 307 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 HIST1H3AP68431 136 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 TGFBR3Q03167 851 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 P2RY6Q15077 328 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 TP53I3Q53FA7 332 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 HIST2H3PS2Q5TEC6 136 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 ANKRD16Q6P6B7 361 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 KCTD18Q6PI47 426 aaPredicted RBP6.91□□□□□ -1.3
SCARB2-220ENST00000640076 PLEKHG7Q6ZR37 379 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 HIST2H3AQ71DI3 136 aa6.91□□□□□ -1.3
SCARB2-220ENST00000640076 SLC16A14Q7RTX9 510 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms